RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 VPS33BQ9H267 617 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 M0QYT0 321 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 KCNA2P16389 499 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 RBM44Q6ZP01 1051 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 MPP5Q8N3R9 675 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 NAV1Q8NEY1 1877 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 IPMKQ8NFU5 416 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 NR1H4Q96RI1 486 aaPredicted RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 HAUS8Q9BT25 410 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 RUVBL2Q9Y230 463 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 ABLIM1O14639 778 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 MOCS2O96007 188 aaPredicted RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 PSMB4P28070 264 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 PLOD1Q02809 727 aaPredicted RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 FOLH1Q04609 750 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 GSTA3Q16772 222 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 ABHD15Q6UXT9 468 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 FBXO16Q8IX29 292 aaPredicted RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 PANX3Q96QZ0 392 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 HMGXB4Q9UGU5 601 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 TGDSO95455 350 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 DLDP09622 509 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 COX4I1P13073 169 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 CHN2P52757 468 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 NAGLUP54802 743 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 ABCE1P61221 599 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 PDK1Q15118 436 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 ENDOVQ8N8Q3 282 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 ELMO2Q96JJ3 720 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 DOCK2Q92608 1830 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 CCDC189A1A4V9 331 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 MAGEC1O60732 1142 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 GP5P40197 560 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 MPP3Q13368 585 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 CATSPER1Q8NEC5 780 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 OR52K1Q8NGK4 314 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 FAM136AQ96C01 138 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 CHST12Q9NRB3 414 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 ATRNL1Q5VV63 1379 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 BHMG1C9JSJ3 638 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 ITM2AO43736 263 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 SIN3BO75182 1162 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 FGFR1P11362 822 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 PSMC3P17980 439 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 VCLP18206 1134 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 GCAP28676 217 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 PTK2BQ14289 1009 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 PCSK7Q16549 785 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 DGKDQ16760 1214 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 SLC5A9Q2M3M2 681 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 TNFAIP8L3Q5GJ75 292 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 FAM83AQ86UY5 434 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 ZBTB46Q86UZ6 589 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 SPATA6LQ8N4H0 392 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 ACO2Q99798 780 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 MRPL46Q9H2W6 279 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 SYNPO2Q9UMS6 1093 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 HNRNPRO43390 633 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 FAM200BP0CF97 657 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 WASHC5Q12768 1159 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 TMEM130Q8N3G9 435 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 BHLHE22Q8NFJ8 381 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 GABPB2Q8TAK5 448 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 DCUN1D5Q9BTE7 237 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 PCDH18Q9HCL0 1135 aa15.28■□□□□ 0.04
USP38-202ENST00000510377 DMAP1Q9NPF5 467 aaPredicted RBP15.28■□□□□ 0.04
USP38-202ENST00000510377 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP38-202ENST00000510377 TRIM13O60858 407 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 PIGNO95427 931 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 ITGA2BP08514 1039 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 FDFT1P37268 417 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 TMEM132BQ14DG7 1078 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 ARL13BQ3SXY8 428 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 TAS1R3Q7RTX0 852 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 CYGBQ8WWM9 190 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 THAP11Q96EK4 314 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 C7orf26Q96N11 449 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 ELOVL4Q9GZR5 314 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 EFCAB1Q9HAE3 211 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 SSU72Q9NP77 194 aaKnown RBP15.27■□□□□ 0.04
USP38-202ENST00000510377 TSR3Q9UJK0 312 aaKnown RBP15.27■□□□□ 0.04
USP38-202ENST00000510377 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
USP38-202ENST00000510377 VAV1P15498 845 aa15.27■□□□□ 0.03
USP38-202ENST00000510377 GMPRP36959 345 aa15.27■□□□□ 0.03
USP38-202ENST00000510377 SERPINB8P50452 374 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms