RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 SEPT4O43236 478 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 HNRNPRO43390 633 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 TK1P04183 234 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 CYP3A4P08684 503 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 PCP4P48539 62 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 CLK3P49761 638 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 RPL15P61313 204 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 SMAD1Q15797 465 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 C16orf89Q6UX73 402 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 PTF1AQ7RTS3 328 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 LAS2Q8IYD9 372 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 BOLLQ8N9W6 283 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 SLC2A12Q8TD20 617 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 PRR11Q96HE9 360 aaPredicted RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 SENP7Q9BQF6 1050 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 PYM1Q9BRP8 204 aaKnown RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 ITM2CQ9NQX7 267 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 SERGEFQ9UGK8 458 aa6.72□□□□□ -1.33
GYPB-210ENST00000508841 COL11A2P13942 1736 aaPredicted RBP6.72□□□□□ -1.33
GYPB-210ENST00000508841 NUDT3O95989 172 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 RNASELQ05823 741 aaKnown RBP6.71□□□□□ -1.34
GYPB-210ENST00000508841 TAF5Q15542 800 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 ASB12Q8WXK4 309 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 GOLGA1Q92805 767 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 MCRS1Q96EZ8 462 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 ZNF845Q96IR2 970 aaPredicted RBP6.71□□□□□ -1.34
GYPB-210ENST00000508841 PIGSQ96S52 555 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 MECRQ9BV79 373 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 TRIM2Q9C040 744 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 TRPC5Q9UL62 973 aaPredicted RBP6.71□□□□□ -1.34
GYPB-210ENST00000508841 GTF2A1LQ9UNN4 478 aa6.71□□□□□ -1.34
GYPB-210ENST00000508841 CYP3A7-CYP3A51PA0A087WV96 503 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 E7EVH7 732 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 USP12O75317 370 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 RNF8O76064 485 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 ATF7P17544 494 aaPredicted RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 CYP3A7P24462 503 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 NDUFS1P28331 727 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 HOXD12P35452 270 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 PRKAA2P54646 552 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 TUBA4AP68366 448 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 NHLH1Q02575 133 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 CUL4BQ13620 913 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 TAF12Q16514 161 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 PROSER3Q2NL68 480 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 GALNTL6Q49A17 601 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 CC2D1BQ5T0F9 858 aaKnown RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 RRAGAQ7L523 313 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 C2CD5Q86YS7 1000 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 FAM98AQ8NCA5 519 aaKnown RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 HASPINQ8TF76 798 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 AFG1LQ8WV93 481 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 ASB2Q96Q27 587 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 NPAS1Q99742 590 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 ELOVL1Q9BW60 279 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.7□□□□□ -1.34
GYPB-210ENST00000508841 NUAK2Q9H093 628 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 NOD2Q9HC29 1040 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 FEM1BQ9UK73 627 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 SLC12A4Q9UP95 1085 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 SPATA31A5Q5VU36 1347 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 SPATA31A6Q5VVP1 1343 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 SPATA31A7Q8IWB4 1347 aa6.7□□□□□ -1.34
GYPB-210ENST00000508841 SAC3D1A6NKF1 404 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 C1QL1O75973 258 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 IGFBP2P18065 325 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 TAS2R50P59544 299 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 PRAMEF17Q5VTA0 474 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 FBXO42Q6P3S6 717 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 CYP26C1Q6V0L0 522 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 RANBP10Q6VN20 620 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 KYAT3Q6YP21 454 aaKnown RBP6.69□□□□□ -1.34
GYPB-210ENST00000508841 SLC39A5Q6ZMH5 540 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 ANKS1BQ7Z6G8 1248 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 FSIP1Q8NA03 581 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 TRMT61AQ96FX7 289 aaKnown RBP6.69□□□□□ -1.34
GYPB-210ENST00000508841 RITA1Q96K30 269 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 HTATIP2Q9BUP3 242 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 PRDM16Q9HAZ2 1276 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 ERVK-5Q9HDB9 667 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 ARL8BQ9NVJ2 186 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 RAB21Q9UL25 225 aa6.69□□□□□ -1.34
GYPB-210ENST00000508841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.68□□□□□ -1.34
GYPB-210ENST00000508841 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 SMIM22K7EJ46 135 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 M0QYT0 321 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 SGPL1O95470 568 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 BMP5P22003 454 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 AGTR2P50052 363 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 RBM5P52756 815 aaKnown RBP eCLIP6.68□□□□□ -1.34
GYPB-210ENST00000508841 RCAN1P53805 252 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 SLC10A2Q12908 348 aaPredicted RBP6.68□□□□□ -1.34
GYPB-210ENST00000508841 RASGRP2Q7LDG7 609 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
GYPB-210ENST00000508841 PTGR2Q8N8N7 351 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms