RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 FAM90A15PP0C7V4 464 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 FAM90A14PP0C7W9 464 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 ST6GAL1P15907 406 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 BLMHQ13867 455 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 CCDC38Q502W7 563 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 PIGKQ92643 395 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 REXO5Q96IC2 774 aaKnown RBP8.02□□□□□ -1.13
CHD1-205ENST00000508756 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
CHD1-205ENST00000508756 GPR78Q96P69 363 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 RTKNQ9BST9 563 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 ZNF70Q9UC06 446 aaPredicted RBP8.02□□□□□ -1.13
CHD1-205ENST00000508756 CNTN6Q9UQ52 1028 aa8.02□□□□□ -1.13
CHD1-205ENST00000508756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.01□□□□□ -1.13
CHD1-205ENST00000508756 ITGA2BP08514 1039 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 RPL15P61313 204 aaKnown RBP8.01□□□□□ -1.13
CHD1-205ENST00000508756 SF3A3Q12874 501 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD1-205ENST00000508756 MTA1Q13330 715 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 CACNA2D3Q8IZS8 1091 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 ENAHQ8N8S7 591 aaPredicted RBP8.01□□□□□ -1.13
CHD1-205ENST00000508756 IGFBPL1Q8WX77 278 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 P2RY11Q96G91 374 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 ZNF778Q96MU6 729 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 TRPC5Q9UL62 973 aaPredicted RBP8.01□□□□□ -1.13
CHD1-205ENST00000508756 ZBTB1Q9Y2K1 713 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 COMMD10Q9Y6G5 202 aa8.01□□□□□ -1.13
CHD1-205ENST00000508756 ACTL6BO94805 426 aa8□□□□□ -1.13
CHD1-205ENST00000508756 HOXD9P28356 352 aaPredicted RBP8□□□□□ -1.13
CHD1-205ENST00000508756 HOXA7P31268 230 aaPredicted RBP8□□□□□ -1.13
CHD1-205ENST00000508756 TRAPPC10P48553 1259 aa8□□□□□ -1.13
CHD1-205ENST00000508756 PNLIPRP1P54315 467 aa8□□□□□ -1.13
CHD1-205ENST00000508756 TAS2R50P59544 299 aa8□□□□□ -1.13
CHD1-205ENST00000508756 ZNF91Q05481 1191 aa8□□□□□ -1.13
CHD1-205ENST00000508756 DMWDQ09019 674 aa8□□□□□ -1.13
CHD1-205ENST00000508756 ETFDHQ16134 617 aa8□□□□□ -1.13
CHD1-205ENST00000508756 TRIM60Q495X7 471 aa8□□□□□ -1.13
CHD1-205ENST00000508756 SULT6B1Q6IMI4 303 aa8□□□□□ -1.13
CHD1-205ENST00000508756 ANO7Q6IWH7 933 aa8□□□□□ -1.13
CHD1-205ENST00000508756 WDR93Q6P2C0 686 aa8□□□□□ -1.13
CHD1-205ENST00000508756 RBM44Q6ZP01 1051 aaKnown RBP8□□□□□ -1.13
CHD1-205ENST00000508756 SCAMP5Q8TAC9 235 aa8□□□□□ -1.13
CHD1-205ENST00000508756 MLXIPQ9HAP2 919 aa8□□□□□ -1.13
CHD1-205ENST00000508756 GRHPRQ9UBQ7 328 aa8□□□□□ -1.13
CHD1-205ENST00000508756 NFU1Q9UMS0 254 aa8□□□□□ -1.13
CHD1-205ENST00000508756 SLC22A23A1A5C7 686 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SLC38A8A6NNN8 435 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 CDK4P11802 303 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SOX2P48431 317 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 ZNF81P51508 661 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 RNASELQ05823 741 aaKnown RBP7.99□□□□□ -1.13
CHD1-205ENST00000508756 ATPAF1Q5TC12 328 aaPredicted RBP7.99□□□□□ -1.13
CHD1-205ENST00000508756 PAPD7Q5XG87 772 aaKnown RBP7.99□□□□□ -1.13
CHD1-205ENST00000508756 KLHL17Q6TDP4 642 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SLC44A2Q8IWA5 706 aaPredicted RBP7.99□□□□□ -1.13
CHD1-205ENST00000508756 PRSS3P2Q8NHM4 247 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 HMGB4Q8WW32 186 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 RSC1A1Q92681 617 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SIGLEC11Q96RL6 698 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SCNM1Q9BWG6 230 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 TRIM2Q9C040 744 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 MAGEH1Q9H213 219 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 PRDM16Q9HAZ2 1276 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 TMEM184CQ9NVA4 438 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 RNF7Q9UBF6 113 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 HERC5Q9UII4 1024 aaKnown RBP7.99□□□□□ -1.13
CHD1-205ENST00000508756 DAPP1Q9UN19 280 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 SLC12A4Q9UP95 1085 aa7.99□□□□□ -1.13
CHD1-205ENST00000508756 C2CD4BA6NLJ0 364 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 RPS6KB1P23443 525 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 SLC37A1P57057 533 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 FOXL2P58012 376 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 HSF1Q00613 529 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 ZNF569Q5MCW4 686 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 DHRS13Q6UX07 377 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 RHPN2Q8IUC4 686 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 STT3BQ8TCJ2 826 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 CUL5Q93034 780 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 RPL36ALQ969Q0 106 aaKnown RBP7.98□□□□□ -1.13
CHD1-205ENST00000508756 ARPC5LQ9BPX5 153 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 VPS16Q9H269 839 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 PABPC3Q9H361 631 aaKnown RBP7.98□□□□□ -1.13
CHD1-205ENST00000508756 PRDM8Q9NQV8 689 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 PI4KBQ9UBF8 816 aa7.98□□□□□ -1.13
CHD1-205ENST00000508756 TOP3BO95985 862 aaKnown RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 ENO1P06733 434 aaKnown RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 CYP19A1P11511 503 aaPredicted RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 GRK5P34947 590 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 CHKAP35790 457 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 MMP13P45452 471 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 AP2B1P63010 937 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 TLE3Q04726 772 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 FAM83BQ5T0W9 1011 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 SLC39A5Q6ZMH5 540 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
CHD1-205ENST00000508756 SRFBP1Q8NEF9 429 aaKnown RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 SPRTNQ9H040 489 aaPredicted RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 TRNAU1APQ9NX07 287 aaKnown RBP7.97□□□□□ -1.13
CHD1-205ENST00000508756 LZTS1Q9Y250 596 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms