RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TIGD5Q53EQ6 642 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 LHX8Q68G74 356 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 DSTYKQ6XUX3 929 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 CAPN12Q6ZSI9 719 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 RAB3IL1Q8TBN0 382 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 LRRC39Q96DD0 335 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 DUSP16Q9BY84 665 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 MAGEB5Q9BZ81 275 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 MYBPHLA2RUH7 354 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 HGSO14964 777 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 KRT37O76014 449 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 B3GAT3O94766 335 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 ITGB1P05556 798 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 DESP17661 470 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 IL4RP24394 825 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 RAB27AP51159 221 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 NEK3P51956 506 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 CACNA2D1P54289 1103 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 MAP3K7CLP57077 242 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 SNX16P57768 344 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 CDK16Q00536 496 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 PDK2Q15119 407 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 NOMO1Q15155 1222 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 ANKRD22Q5VYY1 191 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF449Q6P9G9 518 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 DARS2Q6PI48 645 aaKnown RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 MRRFQ96E11 262 aaKnown RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 PCED1BQ96HM7 432 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 HSFY1Q96LI6 401 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 MED10Q9BTT4 135 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 C11orf84Q9BUA3 381 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 RHOBTB2Q9BYZ6 727 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 IQCGQ9H095 443 aaKnown RBP11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 TEX264Q9Y6I9 313 aa11.37□□□□□ -0.59
SH3RF1-203ENST00000508685 CAPN15O75808 1086 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 CABYRO75952 493 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 MAP3K6O95382 1288 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 NEFHP12036 1026 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ATP6V1C1P21283 382 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ETV4P43268 484 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 BRCC3P46736 316 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PITX1P78337 314 aaPredicted RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ZBTB16Q05516 673 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 KRT81Q14533 505 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PRKD1Q15139 912 aaPredicted RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 BOLA3Q53S33 107 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PPP6R3Q5H9R7 873 aaPredicted RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ATG16L1Q676U5 607 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 C4orf50Q6ZRC1 276 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 UNC45BQ8IWX7 931 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PXYLP1Q8TE99 480 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM149B1Q96BN6 582 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 MTBPQ96DY7 904 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 KCNK16Q96T55 309 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 SYT15Q9BQS2 421 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 MKS1Q9NXB0 559 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 HEY2Q9UBP5 337 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 LAMA3Q16787 3333 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 MOXD2PA6NHM9 499 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 B4GALT3O60512 393 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TMEM63AO94886 807 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 CBX6O95503 412 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 SNRPAP09012 282 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM200BP0CF97 657 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ACADSP16219 412 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TGM2P21980 687 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 EPHB2P29323 1055 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ELK3P41970 407 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PTPN9P43378 593 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ACADSBP45954 432 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 LHX1P48742 406 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 MRPS35P82673 323 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 KCNJ11Q14654 390 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TBCCQ15814 346 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 DBN1Q16643 649 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TRAF7Q6Q0C0 670 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 GPRIN1Q7Z2K8 1008 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM35AQ86V20 835 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ZC3H18Q86VM9 953 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TAB3Q8N5C8 712 aaPredicted RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 CCDC185Q8N715 623 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM71DQ8N9W8 422 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 CENPIQ92674 756 aaPredicted RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 ARMC5Q96C12 935 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms