RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 POLMQ9NP87 494 aaPredicted RBP15.63■□□□□ 0.09
TRIO-211ENST00000508343 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRIO-211ENST00000508343 FAM186AA6NE01 2351 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 EP300Q09472 2414 aaPredicted RBP15.62■□□□□ 0.09
TRIO-211ENST00000508343 SYNJ2BP-COX16A0A087WUM0 186 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 FAM170AA1A519 330 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 KCNU1A8MYU2 1149 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 TIMM44O43615 452 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 TBL1XO60907 577 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 ALDH1A2O94788 518 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 UNGP13051 313 aaPredicted RBP15.62■□□□□ 0.09
TRIO-211ENST00000508343 HNRNPLP14866 589 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRIO-211ENST00000508343 ABCB4P21439 1286 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 MMP8P22894 467 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 CCR1P32246 355 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 SGSHP51688 502 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 FANCCQ00597 558 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 SRSF5Q13243 272 aaKnown RBP15.62■□□□□ 0.09
TRIO-211ENST00000508343 E2F5Q15329 346 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 C2CD6Q53TS8 623 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 MS4A13Q5J8X5 152 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 RNF43Q68DV7 783 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 ANKS1BQ7Z6G8 1248 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 RASSF3Q86WH2 238 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 CHPFQ8IZ52 775 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 HJURPQ8NCD3 748 aaPredicted RBP15.62■□□□□ 0.09
TRIO-211ENST00000508343 UCMAQ8WVF2 138 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 GAB3Q8WWW8 586 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 BAP1Q92560 729 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 PCDHB18PQ96TA0 734 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 AGPAT1Q99943 283 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 TMEM51Q9NW97 253 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 ELOVL2Q9NXB9 296 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 COX16Q9P0S2 106 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 RAB23Q9ULC3 237 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 SMG5Q9UPR3 1016 aaKnown RBP15.62■□□□□ 0.09
TRIO-211ENST00000508343 GPR179Q6PRD1 2367 aa15.62■□□□□ 0.09
TRIO-211ENST00000508343 TYW5A2RUC4 315 aaKnown RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 GOLGA8SH3BPF8 625 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 M0QYT0 321 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 NPC1O15118 1278 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 RPP40O75818 363 aaKnown RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 HLA-FP30511 346 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 NME3Q13232 169 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 MTA1Q13330 715 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 EIF4HQ15056 248 aaKnown RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 CLEC16AQ2KHT3 1053 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 ANO7Q6IWH7 933 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 MMS22LQ6ZRQ5 1243 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 PRR23BQ6ZRT6 265 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 CEP68Q76N32 757 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 ARCQ7LC44 396 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 IRF2BP2Q7Z5L9 587 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 ZNF557Q8N988 423 aaPredicted RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 SLC30A5Q8TAD4 765 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 RUBCNQ92622 972 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 NT5C3BQ969T7 300 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 ACOX2Q99424 681 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 NPY6RQ99463 290 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 EDEM3Q9BZQ6 932 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 NUCKS1Q9H1E3 243 aaKnown RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 XPO7Q9UIA9 1087 aaKnown RBP15.61■□□□□ 0.09
TRIO-211ENST00000508343 TMEM59LQ9UK28 342 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 STAP1Q9ULZ2 295 aa15.61■□□□□ 0.09
TRIO-211ENST00000508343 OTOGLQ3ZCN5 2332 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 F9P00740 461 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 HOXB2P14652 356 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 TACR2P21452 398 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 WASP42768 502 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 NSFP46459 744 aaKnown RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 UBASH3AP57075 661 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 RPS24P62847 133 aaKnown RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 CENPCQ03188 943 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 SLC25A52Q3SY17 297 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 RAP1GAP2Q684P5 730 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 TMEM215Q68D42 235 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 SND1Q7KZF4 910 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIO-211ENST00000508343 KIAA0907Q7Z7F0 614 aaPredicted RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 CCDC117Q8IWD4 279 aaPredicted RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 LGI2Q8N0V4 545 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIO-211ENST00000508343 FIBINQ8TAL6 211 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 WFIKKN2Q8TEU8 576 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 MYEOVQ96EZ4 313 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 PGAP3Q96FM1 320 aaPredicted RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 PRICKLE1Q96MT3 831 aaPredicted RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 GABRG3Q99928 467 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 C11orf70Q9BRQ4 267 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 CIPCQ9C0C6 399 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 SEPT11Q9NVA2 429 aaKnown RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 ADAM22Q9P0K1 906 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 CALCOCO1Q9P1Z2 691 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 STIM2Q9P246 746 aa15.6■□□□□ 0.09
TRIO-211ENST00000508343 THAP10Q9P2Z0 257 aaPredicted RBP15.6■□□□□ 0.09
TRIO-211ENST00000508343 A0A1W2PQF6 199 aa15.59■□□□□ 0.09
TRIO-211ENST00000508343 TCRBV21S2A2A0A5A6 115 aa15.59■□□□□ 0.09
TRIO-211ENST00000508343 LRRC53A6NM62 1247 aa15.59■□□□□ 0.09
TRIO-211ENST00000508343 F5H5T6 163 aa15.59■□□□□ 0.09
TRIO-211ENST00000508343 FLT3P36888 993 aa15.59■□□□□ 0.09
TRIO-211ENST00000508343 CXCR3P49682 368 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms