RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 MANSC1Q9H8J5 431 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 FETUBQ9UGM5 382 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 SUFUQ9UMX1 484 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 USH1CQ9Y6N9 552 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 A0A0G2JND7 137 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 CFAP69A5D8W1 941 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 ARL5CA6NH57 179 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 CAPN9O14815 690 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 DGKIO75912 1065 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 CBX6O95503 412 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 APOEP02649 317 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 NEFHP12036 1026 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 MRPS6P82932 125 aaKnown RBP14.95□□□□□ -0.02
DDX41-208ENST00000507955 DEUP1Q05D60 604 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 AGMOQ6ZNB7 445 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 STRADAQ7RTN6 431 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 TOP6BLQ8N6T0 577 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 KCNV2Q8TDN2 545 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 OLFM3Q96PB7 478 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 LRRC37BQ96QE4 947 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 NPY6RQ99463 290 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 CYLDQ9NQC7 956 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 KANSL3Q9P2N6 904 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 CCDC195A0A1B0GUA6 201 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 E2F8A0AVK6 867 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 SMAPO00193 183 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 RNF103O00237 685 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 GABRDO14764 452 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 NCAM1P13591 858 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 PSMB4P28070 264 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 RGS2P41220 211 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 ETV4P43268 484 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 BRCC3P46736 316 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 IFRD2Q12894 506 aaPredicted RBP14.95□□□□□ -0.02
DDX41-208ENST00000507955 CRHR2Q13324 411 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 NAA25Q14CX7 972 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 PCBP1Q15365 356 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX41-208ENST00000507955 CES4AQ5XG92 561 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 SMYD5Q6GMV2 418 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 DSTYKQ6XUX3 929 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 PRR11Q96HE9 360 aaPredicted RBP14.95□□□□□ -0.02
DDX41-208ENST00000507955 SRPK1Q96SB4 655 aaKnown RBP14.95□□□□□ -0.02
DDX41-208ENST00000507955 GABRQQ9UN88 632 aa14.95□□□□□ -0.02
DDX41-208ENST00000507955 THP07101 528 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 FAM200BP0CF97 657 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 LRPAP1P30533 357 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 NOS2P35228 1153 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 NEK3P51956 506 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 SLC8A3P57103 927 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 TIGD5Q53EQ6 642 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 STKLD1Q8NE28 680 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 OXNAD1Q96HP4 312 aaPredicted RBP14.94□□□□□ -0.02
DDX41-208ENST00000507955 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 EBNA1BP2Q99848 306 aaKnown RBP14.94□□□□□ -0.02
DDX41-208ENST00000507955 SYT15Q9BQS2 421 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 PPCSQ9HAB8 311 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 TXLNGQ9NUQ3 528 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 DONSONQ9NYP3 566 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 TTC3P53804 2025 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 MGEA5O60502 916 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 RFPL1O75677 317 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 MGAT1P26572 445 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 CD52P31358 61 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 MAGEA3P43357 314 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 MTDHQ86UE4 582 aaKnown RBP14.94□□□□□ -0.02
DDX41-208ENST00000507955 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 APOPT1Q96IL0 206 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 RSRC1Q96IZ7 334 aaKnown RBP14.94□□□□□ -0.02
DDX41-208ENST00000507955 PCMTD2Q9NV79 361 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 INPP5FQ9Y2H2 1132 aa14.94□□□□□ -0.02
DDX41-208ENST00000507955 EEF2KO00418 725 aaKnown RBP14.93□□□□□ -0.02
DDX41-208ENST00000507955 DAB1O75553 588 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 NR2C2P49116 596 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 SETDB1Q15047 1291 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 TTC39BQ5VTQ0 682 aaPredicted RBP14.93□□□□□ -0.02
DDX41-208ENST00000507955 FAM35AQ86V20 835 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 IFNL1Q8IU54 200 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 ZNF567Q8N184 647 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 FAM13CQ8NE31 585 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 NT5C3BQ969T7 300 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 APBA2Q99767 749 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 KATNAL1Q9BW62 490 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 GTF2IRD1Q9UHL9 959 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 PSAT1Q9Y617 370 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 A0A0A0MRY4 1105 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 COPEO14579 308 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 PEX11AO75192 247 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 ITGB1P05556 798 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 GNAT1P11488 350 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 AKR1A1P14550 325 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 EPHB2P29323 1055 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 HOXC8P31273 242 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 CAP1Q01518 475 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 SLC18A2Q05940 514 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 WASHC5Q12768 1159 aa14.93□□□□□ -0.02
DDX41-208ENST00000507955 TAF1BQ53T94 588 aaPredicted RBP14.93□□□□□ -0.02
DDX41-208ENST00000507955 RFX8Q6ZV50 586 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms