RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 DESP17661 470 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 PCK1P35558 622 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 AIF1P55008 147 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 SCAPQ12770 1279 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 MS4A13Q5J8X5 152 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 LY6G5CQ5SRR4 150 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 ACBD5Q5T8D3 534 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-210ENST00000506767 PIK3R6Q5UE93 754 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 TMEM25Q86YD3 366 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 CPA6Q8N4T0 437 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 CCDC185Q8N715 623 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 C1orf74Q96LT6 269 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 DDX50Q9BQ39 737 aaKnown RBP13.31□□□□□ -0.28
TCOF1-210ENST00000506767 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 HEBP1Q9NRV9 189 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 HS3ST4Q9Y661 456 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 DUSP10Q9Y6W6 482 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 A0A0U1RQJ8 604 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 DCXO43602 365 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 PENKP01210 267 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 PTMAP06454 111 aaKnown RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 TACR2P21452 398 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 MIPP30301 263 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 MAN1A1P33908 653 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 GJA4P35212 333 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 GAD2Q05329 585 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 NR1H3Q13133 447 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 ARL13BQ3SXY8 428 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 C5orf22Q49AR2 442 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 RNF43Q68DV7 783 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 ZNF662Q6ZS27 426 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 CYP4V2Q6ZWL3 525 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 KIAA1328Q86T90 577 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 TXLNBQ8N3L3 684 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 ATRIPQ8WXE1 791 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 EDAQ92838 391 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 MYEOVQ96EZ4 313 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
TCOF1-210ENST00000506767 PEBP4Q96S96 227 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 OSBPL2Q9H1P3 480 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
TCOF1-210ENST00000506767 MYOFQ9NZM1 2061 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 ADH1CP00326 375 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 ADH5P11766 374 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 TCF4P15884 667 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 SGSHP51688 502 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 NRG1Q02297 640 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 AUHQ13825 339 aaKnown RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 RAP1GAP2Q684P5 730 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 SCYL2Q6P3W7 929 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 TPGS1Q6ZTW0 290 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 TMA16Q96EY4 203 aaKnown RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 MSANTD3Q96H12 275 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 MAGEB5Q9BZ81 275 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 C8orf33Q9H7E9 229 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-210ENST00000506767 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 FBXO10Q9UK96 956 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 USP18Q9UMW8 372 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 PIAS3Q9Y6X2 628 aa13.29□□□□□ -0.28
TCOF1-210ENST00000506767 IGLV3-10A0A075B6K4 115 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 DRGXA6NNA5 263 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SPECC1L-ADORA2AF8WAN1 911 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 CACNG3O60359 315 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 BUB1BO60566 1050 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 TSPAN3O60637 253 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 CCDC175P0C221 793 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 ALADP13716 330 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 TYRP14679 529 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 IL1R2P27930 398 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 CTHP32929 405 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 OPRD1P41143 372 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 NOP2P46087 812 aaKnown RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SOX9P48436 509 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 STARD6P59095 220 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SLC25A11Q02978 314 aaKnown RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 PRKCQQ04759 706 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 KIF5AQ12840 1032 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms