RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 XPO4Q9C0E2 1151 aaKnown RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 HAUS4Q9H6D7 363 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.56□□□□□ -1.2
GYPB-206ENST00000506516 ADAM22Q9P0K1 906 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 DLGAP2Q9P1A6 1054 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 DEC1Q9P2X7 70 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 STAP1Q9ULZ2 295 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 CAPN11Q9UMQ6 739 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 LUC7L2Q9Y383 392 aaKnown RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 A0A0A0MRY4 1105 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TYW5A2RUC4 315 aaKnown RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 NEDD8-MDP1E9PL57 170 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 GOLGA8SH3BPF8 625 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 M0QYT0 321 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 IRAK2O43187 625 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MSI1O43347 362 aaKnown RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 LAMTOR5O43504 91 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 ACSL4O60488 711 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 GRAP2O75791 330 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 IGLV3-27P01718 113 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 APOEP02649 317 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 APODP05090 189 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 CALB1P05937 261 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TYRP14679 529 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 ABCB4P21439 1286 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MMP8P22894 467 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 CCR1P32246 355 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 PRKCIP41743 596 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 GRIA2P42262 883 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MATKP42679 507 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 SLC6A11P48066 632 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 CCR3P51677 355 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 CCINQ13939 588 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TRIM14Q14142 442 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 LAPTM4AQ15012 233 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 E2F5Q15329 346 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MPPE1Q53F39 396 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 ACAD10Q6JQN1 1059 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 ARCQ7LC44 396 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TAC4Q86UU9 113 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 VPS36Q86VN1 386 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 XYLT1Q86Y38 959 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 PHF13Q86YI8 300 aaPredicted RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 CCDC117Q8IWD4 279 aaPredicted RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 PHTF2Q8N3S3 785 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 ATP6V0D2Q8N8Y2 350 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 SLC30A5Q8TAD4 765 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TMA16Q96EY4 203 aaKnown RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 VCPIP1Q96JH7 1222 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 BTN2A3PQ96KV6 586 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 PCDHB18PQ96TA0 734 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 TTYH3Q9C0H2 523 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 FAM204AQ9H8W3 233 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 FBRSL1Q9HCM7 1045 aaKnown RBP7.55□□□□□ -1.2
GYPB-206ENST00000506516 ARHGEF4Q9NR80 690 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 DDIT4Q9NX09 232 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MARK1Q9P0L2 795 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 STOML2Q9UJZ1 356 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 PAXBP1Q9Y5B6 917 aa7.55□□□□□ -1.2
GYPB-206ENST00000506516 MYH10P35580 1976 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 SYNJ2BP-COX16A0A087WUM0 186 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 TBC1D3BA6NDS4 549 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 CACNG3O60359 315 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 TULP3O75386 442 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 DAB1O75553 588 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 KAT7O95251 611 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 EGFP01133 1207 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 SERPING1P05155 500 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 KRT3P12035 628 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 GZMAP12544 262 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 DESP17661 470 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 OPRD1P41143 372 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 TNFRSF4P43489 277 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 CXCL12P48061 93 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 DGKGP49619 791 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 MRPS21P82921 87 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 CENPCQ03188 943 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 MTAPQ13126 283 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 NME3Q13232 169 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ARID5BQ14865 1188 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ANGPT1Q15389 498 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 SLC25A52Q3SY17 297 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 C2CD6Q53TS8 623 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ZC3H12AQ5D1E8 599 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 ACBD5Q5T8D3 534 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 GRAMD4Q6IC98 578 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 FSTL4Q6MZW2 842 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 MMS22LQ6ZRQ5 1243 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 ZNF571Q7Z3V5 609 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 FAM217AQ8IXS0 508 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 DRC7Q8IY82 874 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms