RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 COL26A1Q96A83 441 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 AIFM3Q96NN9 605 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 UIMC1Q96RL1 719 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 STRA6Q9BX79 667 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NAT10Q9H0A0 1025 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CARD9Q9H257 536 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CYP26B1Q9NR63 512 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MBD2Q9UBB5 411 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DNAJB4Q9UDY4 337 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SRP68Q9UHB9 627 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MSRAQ9UJ68 235 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HCN2Q9UL51 889 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ANK1P16157 1881 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HEATR9A2RTY3 570 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SMIM22K7EJ46 135 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC22A2O15244 555 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HOXC11O43248 304 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CBR1P16152 277 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ATP2A2P16615 1042 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 BMP6P22004 513 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GARTP22102 1010 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PKLRP30613 574 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 EVI2BP34910 448 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 BCAP31P51572 246 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PRKAA2P54646 552 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PPP2R2BQ00005 443 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TTLL4Q14679 1199 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 EZH2Q15910 746 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DUSP7Q16829 419 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TPD52L1Q16890 204 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MBLAC2Q68D91 279 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 THSD4Q6ZMP0 1018 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TOM1L2Q6ZVM7 507 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF677Q86XU0 584 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 VSTM4Q8IW00 320 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CBARPQ8N350 705 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC4A11Q8NBS3 891 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 LRRC15Q8TF66 581 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GPKOWQ92917 476 aaPredicted RBP eCLIP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC127Q96BQ5 260 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC7A6OSQ96CW6 309 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM169Q96HH4 297 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC29A1Q99808 456 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GON7Q9BXV9 100 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KATNBL1Q9H079 304 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NTN4Q9HB63 628 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PARVBQ9HBI1 364 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGEF38Q9NXL2 777 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PADI4Q9UM07 663 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MAP4K5Q9Y4K4 846 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SNCAIPQ9Y6H5 919 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 A0A0D9SFI3 127 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PI4K2BG5E9Z4 385 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LAD1O00515 517 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 AP3D1O14617 1153 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ADAMTS3O15072 1205 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 POLR1CO15160 346 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 STX10O60499 249 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RHOBTB1O94844 696 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ANXA1P04083 346 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC192P0DO97 292 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZSCAN22P10073 491 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VAV1P15498 845 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PCSK6P29122 969 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LONP1P36776 959 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MAGEA11P43364 429 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ALDH3B2P48448 385 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HIRAP54198 1017 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SSTP61278 116 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CTBSQ01459 385 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ENPEPQ07075 957 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DMPKQ09013 629 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF252P-AS1Q0IIN9 211 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KCNC3Q14003 757 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 IKBKEQ14164 716 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SMAD2Q15796 467 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KLHL38Q2WGJ6 581 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ERMARDQ5T6L9 678 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CGB2Q6NT52 195 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DRICH1Q6PGQ1 229 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TICAM1Q8IUC6 712 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NELFCDQ8IXH7 590 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CSGALNACT2Q8N6G5 542 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FAM181AQ8N9Y4 354 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 OR8H1Q8NGG4 311 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 WDR48Q8TAF3 677 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DIO2Q92813 273 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CEP19Q96LK0 163 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EHD1Q9H4M9 534 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MRPL44Q9H9J2 332 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CYP39A1Q9NYL5 469 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DPP7Q9UHL4 492 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA7Q9UN72 937 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 COG5Q9UP83 839 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MROH7-TTC4A0A0A0MT08 1334 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NLRC5Q86WI3 1866 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MAGEA13PA6NCF6 341 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TPP1O14773 563 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ATP2A1O14983 1001 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms