RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 MANEALQ5VSG8 457 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 Q6ZNB5 142 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 HTR3DQ70Z44 454 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 MIB1Q86YT6 1006 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 FAM217AQ8IXS0 508 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 RASGEF1CQ8N431 466 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 DEFB123Q8N688 67 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 SPDYE1Q8NFV5 336 aaPredicted RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 RAPGEF5Q92565 580 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 TSC1Q92574 1164 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 RNF34Q969K3 372 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 FAF2Q96CS3 445 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 RBM41Q96IZ5 413 aaKnown RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 ZSWIM3Q96MP5 696 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 NECTIN4Q96NY8 510 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 OSBPL9Q96SU4 736 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 PRMT1Q99873 361 aaKnown RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 TUBB2BQ9BVA1 445 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 NACA2Q9H009 215 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 RETREG1Q9H6L5 497 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 UBE2ZQ9H832 354 aaPredicted RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 ZWILCHQ9H900 591 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 KIF9Q9HAQ2 790 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 TRPC7Q9HCX4 862 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 TMPRSS4Q9NRS4 437 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 GKN1Q9NS71 199 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 TDP1Q9NUW8 608 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 COX16Q9P0S2 106 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 RCOR3Q9P2K3 495 aaPredicted RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 SLC12A6Q9UHW9 1150 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 CD207Q9UJ71 328 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 TTC7AQ9ULT0 858 aaPredicted RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 ZNF510Q9Y2H8 683 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 CPQQ9Y646 472 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 SAR1BQ9Y6B6 198 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 ZFP37Q9Y6Q3 630 aaPredicted RBP7.46□□□□□ -1.22
NUP54-204ENST00000506098 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.22
NUP54-204ENST00000506098 IGLV3-10A0A075B6K4 115 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 E2F8A0AVK6 867 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 LEFTY2O00292 366 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 GFRA2O00451 464 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 DYNC1I1O14576 645 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 KCNK3O14649 394 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ACSL4O60488 711 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 KLKB1P03952 638 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CKMP06732 381 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 PYGMP11217 842 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 FOSL2P15408 326 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 IL4RP24394 825 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CALRP27797 417 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 CORO1AP31146 461 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 AVPR1AP37288 418 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CDKN2BP42772 138 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 HARS2P49590 506 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 CDH6P55285 790 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 USP4Q13107 963 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 DPYSL3Q14195 570 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 ZNF77Q15935 545 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 SMTNL2Q2TAL5 461 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 TFDP3Q5H9I0 405 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 MS4A13Q5J8X5 152 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 PIK3R6Q5UE93 754 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 MFSD7Q6UXD7 560 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 SPOCD1Q6ZMY3 1216 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ARID3BQ8IVW6 561 aaPredicted RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 MAP7D3Q8IWC1 876 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ZNF683Q8IZ20 524 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 PYROXD2Q8N2H3 581 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CPXM2Q8N436 756 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CELF5Q8N6W0 485 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 KCTD6Q8NC69 237 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ACTRT1Q8TDG2 376 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 ING5Q8WYH8 240 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 HSPH1Q92598 858 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 FGF13Q92913 245 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 WBP2Q969T9 261 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 ZNF670Q9BS34 389 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 APOL5Q9BWW9 433 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 MAGEB5Q9BZ81 275 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 POMKQ9H5K3 350 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 DHX35Q9H5Z1 703 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 PCDH18Q9HCL0 1135 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.45□□□□□ -1.22
NUP54-204ENST00000506098 CWC15Q9P013 229 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 PPARGC1AQ9UBK2 798 aaKnown RBP7.45□□□□□ -1.22
NUP54-204ENST00000506098 RNF14Q9UBS8 474 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 OR12D3Q9UGF7 316 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CDH22Q9UJ99 828 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CDH7Q9ULB5 785 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 NEU3Q9UQ49 428 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 CCL26Q9Y258 94 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 SH3BP1Q9Y3L3 701 aa7.45□□□□□ -1.22
NUP54-204ENST00000506098 HS3ST4Q9Y661 456 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms