RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RNF103O00237 685 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 LIN7AO14910 233 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MFSD11O43934 449 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 DGKIO75912 1065 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 F7P08709 466 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ACADSP16219 412 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SCN1AP35498 2009 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PEX19P40855 299 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC1A6P48664 564 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SULT1E1P49888 294 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 BCAT1P54687 386 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 KLC1Q07866 573 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 NME3Q13232 169 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 OLIG2Q13516 323 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 TMEM154Q6P9G4 183 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC27A1Q6PCB7 646 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PACS1Q6VY07 963 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 FASTKD5Q7L8L6 764 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 UNC93AQ86WB7 457 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 WDR75Q8IWA0 830 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 DEFB106AQ8N104 65 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 CFAP61Q8NHU2 1237 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 CDKL2Q92772 493 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ATP2A3Q93084 1043 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PGBD4Q96DM1 585 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 P2RY11Q96G91 374 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SNX27Q96L92 541 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SPATA13Q96N96 652 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SNX25Q9H3E2 840 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 FAM124BQ9H5Z6 455 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PLEKHA5Q9HAU0 1116 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 GOLGA2P5Q9HBQ8 144 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 XPNPEP3Q9NQH7 507 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ADARB2Q9NS39 739 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MKS1Q9NXB0 559 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 TXNDC16Q9P2K2 825 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 STX18Q9P2W9 335 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MORF4L1Q9UBU8 362 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 EMCNQ9ULC0 261 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MAGED2Q9UNF1 606 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 DNAJC16Q9Y2G8 782 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 BPTFQ12830 3046 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 A6NHS1 94 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZNF487B1APH4 448 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SPTLC1O15269 473 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 RECQL4O94761 1208 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ALDH1A2O94788 518 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 STK10O94804 968 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 TOMM70O94826 608 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 GSRP00390 522 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 CNTFP26441 200 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PSMB4P28070 264 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MLH1P40692 756 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 MATKP42679 507 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 GTF2A2P52657 109 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PITX1P78337 314 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZBTB6Q15916 424 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 DCAF4L1Q3SXM0 396 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 FBXO47Q5MNV8 452 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 C1orf146Q5VVC0 180 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 KYAT3Q6YP21 454 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 RIPOR1Q6ZS17 1223 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ARCQ7LC44 396 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 C10orf107Q8IVU9 208 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 TP53INP2Q8IXH6 220 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ULK2Q8IYT8 1036 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PPFIBP2Q8ND30 876 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 RAB3IL1Q8TBN0 382 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 PIWIL2Q8TC59 973 aaKnown RBP7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 UCMAQ8WVF2 138 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 KBTBD7Q8WVZ9 684 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 AGAP3Q96P47 875 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 OSMRQ99650 979 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SHCBP1LQ9BZQ2 653 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 YIPF3Q9GZM5 350 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 SYBUQ9NX95 663 aa7.84□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 ARHGAP42A6NI28 874 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 KCNK1O00180 336 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 CLDN5O00501 218 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 MAP3K7O43318 606 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 MAGEC1O60732 1142 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 USP12O75317 370 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 CIB2O75838 187 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 TM7SF2O76062 418 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 BAG2O95816 211 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 SERPINA6P08185 405 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 ITGA2BP08514 1039 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 SKIP12755 728 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 TYK2P29597 1187 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 FDFT1P37268 417 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 NDUFV1P49821 464 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 TUBP50607 506 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 RAP1GDS1P52306 607 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 ADIGQ0VDE8 80 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 WASHC5Q12768 1159 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 PPIL2Q13356 520 aa7.83□□□□□ -1.16
PPARGC1A-204ENST00000506055 R3HDM1Q15032 1099 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms