RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CD38P28907 300 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 NUDT1P36639 197 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 RHDQ02161 417 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 CFHR1Q03591 330 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 ENPEPQ07075 957 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 INCA1Q0VD86 236 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 TARDBPQ13148 414 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEDD9-210ENST00000505589 KIAA0895LQ68EN5 471 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 SCARA5Q6ZMJ2 495 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 CHST9Q7L1S5 443 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 UNC45BQ8IWX7 931 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 FAM217AQ8IXS0 508 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 KDM1BQ8NB78 822 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 GANCQ8TET4 914 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 RNF139Q8WU17 664 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 DDX50Q9BQ39 737 aaKnown RBP10.35□□□□□ -0.75
NEDD9-210ENST00000505589 ERVMER34-1Q9H9K5 563 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 TARSL2A2RTX5 802 aaKnown RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 J3QKU1 62 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 PDXKO00764 312 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 KCNK3O14649 394 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 MAPK13O15264 365 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 SPTLC2O15270 562 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 IRAK2O43187 625 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 ASLP04424 464 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 CKMT2P17540 419 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 PRKCHP24723 683 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 NNMTP40261 264 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 NASPP49321 788 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 PGFP49763 221 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 RPS14P62263 151 aaKnown RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 OVGP1Q12889 678 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 TRIP4Q15650 581 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 ADGRF1Q5T601 910 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 ZNF248Q8NDW4 579 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 HPS3Q969F9 1004 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 JAKMIP2Q96AA8 810 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 DHX58Q96C10 678 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 IPO9Q96P70 1041 aaKnown RBP10.34□□□□□ -0.75
NEDD9-210ENST00000505589 OMDQ99983 421 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 SLC39A2Q9NP94 309 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 PRSS16Q9NQE7 514 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 FBXL12Q9NXK8 326 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 FAM13BQ9NYF5 915 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 STOML2Q9UJZ1 356 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 FZD4Q9ULV1 537 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 APC2O95996 2303 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 MYH10P35580 1976 aa10.34□□□□□ -0.75
NEDD9-210ENST00000505589 MDM4O15151 490 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CUTAO60888 179 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 MOCS3O95396 460 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 VNN1O95497 513 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 ZBED1O96006 694 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 HMBSP08397 361 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 PABPC1P11940 636 aaKnown RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 KRT13P13646 458 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 PLA2G2AP14555 144 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 ITPKBP27987 946 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 HLA-FP30511 346 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 PIK3CAP42336 1068 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 RXRGP48443 463 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CASP4P49662 377 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CCR5P51681 352 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 YWHAGP61981 247 aaKnown RBP eCLIP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 E2F4Q16254 413 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 MBLAC2Q68D91 279 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 KIAA0907Q7Z7F0 614 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 SCD5Q86SK9 330 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 PRPF39Q86UA1 669 aaKnown RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 IQCHQ86VS3 1027 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 RBBP8NLQ8NC74 664 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 LINC00301Q8NCQ3 95 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 OR2T34Q8NGX1 318 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 SAP25Q8TEE9 199 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 AZIN2Q96A70 460 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 ZNF578Q96N58 590 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 USP28Q96RU2 1077 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 SDCBP2Q9H190 292 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 RSPH9Q9H1X1 276 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-210ENST00000505589 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 AASDHPPTQ9NRN7 309 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 DMAC2Q9NW81 257 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 GGA2Q9UJY4 613 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 CLCA2Q9UQC9 943 aa10.33□□□□□ -0.76
NEDD9-210ENST00000505589 A0A087X0B3 334 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms