RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ATMQ13315 3056 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 WNT9AO14904 365 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 STX6O43752 255 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 EXOC3O60645 756 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 VNN1O95497 513 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 CKMT2P17540 419 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 TRIM21P19474 475 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 ARRB1P49407 418 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 AP3M2P53677 418 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 SNRPFP62306 86 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 INSM1Q01101 510 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 BROXQ5VW32 411 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 ZNF776Q68DI1 518 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 NCEH1Q6PIU2 408 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 ADIPOR2Q86V24 386 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 TMA16Q96EY4 203 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 LRRC27Q9C0I9 530 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 FBRSQ9HAH7 460 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 PNPLA8Q9NP80 782 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 ABCB8Q9NUT2 735 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 MARCH2Q9P0N8 246 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
CCHCR1-219ENST00000505392 MUC22E2RYF6 1773 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 A0A1W2PR77 199 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 TLR4O00206 839 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 YKT6O15498 198 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 WISP1O95388 367 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 MT-CO3P00414 261 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 ATP5BP06576 529 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 DLDP09622 509 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 C6P13671 934 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 HOXD9P28356 352 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 TMPRSS3P57727 454 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 PDE4CQ08493 712 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 PKDCCQ504Y2 493 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 MBLAC2Q68D91 279 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 SPOPLQ6IQ16 392 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 USP30Q70CQ3 517 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 RSRC2Q7L4I2 434 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 DCBLD1Q8N8Z6 715 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 WFIKKN2Q8TEU8 576 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 RFFLQ8WZ73 363 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 TWNKQ96RR1 684 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 PABPC3Q9H361 631 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 STRIP2Q9ULQ0 834 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 SCML1Q9UN30 329 aa12.08□□□□□ -0.48
CCHCR1-219ENST00000505392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 A0A1W2PP55 124 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 LRRC72A6NJI9 287 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 RPN1P04843 607 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 PABPC1P11940 636 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 POLR2EP19388 210 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 RXRGP48443 463 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 UCNP55089 124 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 PCBP4P57723 403 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 ASIC1P78348 528 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 DLG4P78352 724 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 CLDN10P78369 228 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 E2F1Q01094 437 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 FAM26FQ5R3K3 315 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 FAM173BQ6P4H8 233 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 KIAA0907Q7Z7F0 614 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 ZC3H3Q8IXZ2 948 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 AHI1Q8N157 1196 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 ZNF578Q96N58 590 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 NT5C1AQ9BXI3 368 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 DUSP16Q9BY84 665 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 TNMDQ9H2S6 317 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 SERGEFQ9UGK8 458 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 PCDHB1Q9Y5F3 818 aa12.07□□□□□ -0.48
CCHCR1-219ENST00000505392 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 KLK10O43240 276 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 SLC28A2O43868 658 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 RNASEH1O60930 286 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 MPOP05164 745 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 KRT10P13645 584 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 ACP1P24666 158 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 ASPAP45381 313 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 HARS2P49590 506 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 NXPH1P58417 271 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 AMPD3Q01432 767 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 SFSWAPQ12872 951 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
CCHCR1-219ENST00000505392 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms