RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GBP1P32455 592 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 MAGEA1P43355 309 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 SGSHP51688 502 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TBX4P57082 545 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TAS2R40P59535 323 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 KLF1Q13351 362 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 GET4Q7L5D6 327 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 SPC24Q8NBT2 197 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TTC17Q96AE7 1141 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 CLDN23Q96B33 292 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TDGF1P13385 188 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 CCR1P32246 355 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 PAFAH1B3Q15102 231 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 CCDC85BQ15834 202 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TXLNBQ8N3L3 684 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 EMC1Q8N766 993 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 FAM172AQ8WUF8 416 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 EDEM1Q92611 657 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 IER2Q9BTL4 223 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 LRRC19Q9H756 370 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 PDFQ9HBH1 243 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 PDGFRAP16234 1089 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 MIPP30301 263 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 SULT1E1P49888 294 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 ATXN1P54253 815 aaKnown RBP8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 PPP2R5EQ16537 467 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMEM196Q5HYL7 178 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 TXNRD3NBQ6F5E7 133 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 BBS7Q8IWZ6 715 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 CCAR2Q8N163 923 aaKnown RBP8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 RASGEF1CQ8N431 466 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 CTNNBL1Q8WYA6 563 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 ACSF2Q96CM8 615 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 OLFM3Q96PB7 478 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 ACE2Q9BYF1 805 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 SORCS3Q9UPU3 1222 aa8.59□□□□□ -1.04
CDC42SE2-208ENST00000505065 MYO7AQ13402 2215 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PIK3R2O00459 728 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 SLC9A3R1O14745 358 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 MSI1O43347 362 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 CORO1AP31146 461 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 DCAF6Q58WW2 860 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ING5Q8WYH8 240 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 NELL1Q92832 810 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 MYO19Q96H55 970 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 KCTD15Q96SI1 283 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZNF670Q9BS34 389 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 RAD54BQ9Y620 910 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■□□□□ 8.1
CDC42SE2-208ENST00000505065 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 AKR1B10O60218 316 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PEX11BO96011 259 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PRLRP16471 622 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 SDC4P31431 198 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 COPS2P61201 443 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZXDAP98168 799 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PRKCQQ04759 706 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZNF33AQ06730 810 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 TDGQ13569 410 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ERMARDQ5T6L9 678 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ALG1LQ6GMV1 187 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 UMODL1-AS1Q8N2C9 162 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 FIBINQ8TAL6 211 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 TADA1Q96BN2 335 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PSMB7Q99436 277 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 SPHK2Q9NRA0 654 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 GKN1Q9NS71 199 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 XPO7Q9UIA9 1087 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 MAGED2Q9UNF1 606 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 TFR2Q9UP52 801 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 FAM72CH0Y354 149 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PAGE1O75459 146 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 HNRNPLP14866 589 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 VIPR2P41587 438 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 DPYSL3Q14195 570 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 SIX1Q15475 284 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 FAM72AQ5TYM5 149 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 FAM72DQ6L9T8 149 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 FAM72BQ86X60 149 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 CFAP97Q9P2B7 532 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 TRIM10Q9UDY6 481 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 USP18Q9UMW8 372 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 PAXBP1Q9Y5B6 917 aa8.58□□□□□ -1.04
CDC42SE2-208ENST00000505065 CHURC1-FNTBB4DL54 471 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 M0QYT0 321 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZMPSTE24O75844 475 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 CCDC175P0C221 793 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 CCINQ13939 588 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 TSR1Q2NL82 804 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms