RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 IQGAP2Q13576 1575 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3DA0A087WVF3 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3IA0A087WXS9 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3EA0A087X179 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3KA0A087X1G2 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3BA6NDS4 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A18PA6NE21 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3FA6NER0 549 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A16PA6NEW6 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A9PA6NNJ1 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 EFCAB8A8MWE9 144 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A5PA8MXJ8 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3LB9A6J9 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 H0Y3Z8 333 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 PPFIA2O75334 1257 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 LARGE1O95461 756 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 MT-CO3P00414 261 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 C1RP00736 705 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A15PP0C7V4 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 FAM90A14PP0C7W9 464 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3HP0C7X1 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 CYP2D6P10635 497 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SERPINA4P29622 427 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 MAPK9P45984 424 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 VPS41P49754 854 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 WDR5P61964 334 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 AAK1Q2M2I8 961 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 ADCK5Q3MIX3 580 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 ZNF362Q5T0B9 420 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3GQ6DHY5 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TANGO2Q6ICL3 276 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3CQ6IPX1 549 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SYT13Q7L8C5 426 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 C2CD5Q86YS7 1000 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SMAP1Q8IYB5 467 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 C16orf71Q8IYS4 520 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 TBC1D3Q8IZP1 549 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 BOLLQ8N9W6 283 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 OR52L2PQ8NGH6 319 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 PPM1EQ8WY54 764 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SARAFQ96BY9 339 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 EDC3Q96F86 508 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 ZSCAN31Q96LW9 406 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 FYTTD1Q96QD9 318 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 TIMP4Q99727 224 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 ISCA1Q9BUE6 129 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 ALG13Q9NP73 1137 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 ABHD10Q9NUJ1 306 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 LIN7CQ9NUP9 197 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 ASIC5Q9NY37 505 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 KIF17Q9P2E2 1029 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 KCND3Q9UK17 655 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 C19orf53Q9UNZ5 99 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 HEMK1Q9Y5R4 338 aaPredicted RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 RAPGEF2Q9Y4G8 1499 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 PPRC1Q5VV67 1664 aaKnown RBP3.64□□□□□ -1.83
RFC1-209ENST00000504974 CTTNBP2Q8WZ74 1663 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 SPATA31A6Q5VVP1 1343 aa3.64□□□□□ -1.83
RFC1-209ENST00000504974 PCF11O94913 1555 aaKnown RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 GLI2P10070 1586 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 AGAP5A6NIR3 686 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 E7EVH7 732 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 UBE2Q2LH0YL09 131 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 RXRAP19793 462 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 CST5P28325 142 aaPredicted RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 SLC8A1P32418 973 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 GRK5P34947 590 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 CCT5P48643 541 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 AARSP49588 968 aaKnown RBP eCLIP3.63□□□□□ -1.83
RFC1-209ENST00000504974 RBM5P52756 815 aaKnown RBP eCLIP3.63□□□□□ -1.83
RFC1-209ENST00000504974 SOX10P56693 466 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 FAM3BP58499 235 aaPredicted RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 CFHR3Q02985 330 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 PPFIA1Q13136 1202 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 KPNB1Q14974 876 aaKnown RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 CNGA3Q16281 694 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 TAF12Q16514 161 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 FAM187BQ17R55 369 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 GALNTL6Q49A17 601 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 CERKLQ49MI3 558 aaPredicted RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 HSP90AB4PQ58FF6 505 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 PRAMEF17Q5VTA0 474 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 ACSM6Q6P461 480 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 MOGAT3Q86VF5 341 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 ANKRD18AQ8IVF6 992 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 FTSJ3Q8IY81 847 aaKnown RBP3.63□□□□□ -1.83
RFC1-209ENST00000504974 AKAP1Q92667 903 aaKnown RBP eCLIP3.63□□□□□ -1.83
RFC1-209ENST00000504974 RSC1A1Q92681 617 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 REPS1Q96D71 796 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 ELOVL1Q9BW60 279 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 CDCP1Q9H5V8 836 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 ARL8BQ9NVJ2 186 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 RRN3Q9NYV6 651 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 NDUFAF4Q9P032 175 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 SERGEFQ9UGK8 458 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 BAG5Q9UL15 447 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 FZD4Q9ULV1 537 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 SLC12A4Q9UP95 1085 aa3.63□□□□□ -1.83
RFC1-209ENST00000504974 GPR52Q9Y2T5 361 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms