RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PRKCHP24723 683 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 HOXD9P28356 352 aaPredicted RBP13.72□□□□□ -0.21
DDX41-204ENST00000504807 CYP4F3Q08477 520 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 PAK1Q13153 545 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 ENPP2Q13822 863 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 FUT11Q495W5 492 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 RSRC2Q7L4I2 434 aaKnown RBP13.72□□□□□ -0.21
DDX41-204ENST00000504807 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 CHPFQ8IZ52 775 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 KCNV2Q8TDN2 545 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 MRGPRX1Q96LB2 322 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 XPO6Q96QU8 1125 aaKnown RBP13.72□□□□□ -0.21
DDX41-204ENST00000504807 LRRC4Q9HBW1 653 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 HESX1Q9UBX0 185 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 SLC27A6Q9Y2P4 619 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 STON1Q9Y6Q2 735 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 A0A087WV48 116 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 BECN2A8MW95 431 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 MAP3K13O43283 966 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 SH3BP5O60239 455 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 SETSIPP0DME0 302 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 CD59P13987 128 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 TRIM21P19474 475 aaKnown RBP13.71□□□□□ -0.21
DDX41-204ENST00000504807 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
DDX41-204ENST00000504807 SLC6A4P31645 630 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 PITX1P78337 314 aaPredicted RBP13.71□□□□□ -0.21
DDX41-204ENST00000504807 COG7P83436 770 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 STIM1Q13586 685 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
DDX41-204ENST00000504807 CNGA2Q16280 664 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 NADSYN1Q6IA69 706 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 SLC23A3Q6PIS1 610 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 FOXR2Q6PJQ5 311 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 SCML4Q8N228 414 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 CPXM2Q8N436 756 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 MINDY1Q8N5J2 469 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.21
DDX41-204ENST00000504807 CYP8B1Q9UNU6 501 aa13.71□□□□□ -0.21
DDX41-204ENST00000504807 USP9XQ93008 2570 aaPredicted RBP13.71□□□□□ -0.22
DDX41-204ENST00000504807 PCDH15Q96QU1 1955 aa13.71□□□□□ -0.22
DDX41-204ENST00000504807 KCNJ18B7U540 433 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 PYCARD-AS1I3L0S3 204 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 SLC9A1P19634 815 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 HLA-FP30511 346 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 GPD2P43304 727 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 ABCG1P45844 678 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 RPL34P49207 117 aaKnown RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 COPAP53621 1224 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 GCNT1Q02742 428 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 GFPT1Q06210 699 aaPredicted RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 ZNF234Q14588 700 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 MSANTD2Q6P1R3 559 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 TADA2BQ86TJ2 420 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 SIX6OS1Q8N1H7 587 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 PLD4Q96BZ4 506 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 PRICKLE1Q96MT3 831 aaPredicted RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 MIS12Q9H081 205 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 THAP10Q9P2Z0 257 aaPredicted RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
DDX41-204ENST00000504807 STOML2Q9UJZ1 356 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 PILRBQ9UKJ0 227 aa13.7□□□□□ -0.22
DDX41-204ENST00000504807 P4HA2O15460 535 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 AFPP02771 609 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 HLA-EP13747 358 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 YWHAEP62258 255 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 SYPL2Q5VXT5 272 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 LYSMD4Q5XG99 296 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 CACUL1Q86Y37 369 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 LMLNQ96KR4 655 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 FCRL2Q96LA5 508 aaPredicted RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 IPO9Q96P70 1041 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 GTPBP4Q9BZE4 634 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 DCLK3Q9C098 648 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 MTG2Q9H4K7 406 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 SIX2Q9NPC8 291 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 KIAA1468Q9P260 1216 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms