RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ALDOAP04075 364 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 MATN1P21941 496 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 VPS41P49754 854 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 RCAN1P53805 252 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 INHBEP58166 350 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 FAM3BP58499 235 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 TAS2R50P59544 299 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 MFSD13AQ14CX5 517 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 RALBP1Q15311 655 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CNGA3Q16281 694 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CTXN3Q4LDR2 81 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CC2D1BQ5T0F9 858 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CEP85Q6P2H3 762 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 OLFML1Q6UWY5 402 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 C16orf71Q8IYS4 520 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 ANKRD44Q8N8A2 993 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 SRFBP1Q8NEF9 429 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CAGE1Q8TC20 777 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 AKAP1Q92667 903 aaKnown RBP eCLIP5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 TWSG1Q9GZX9 223 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 CDCP1Q9H5V8 836 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 PLEKHA2Q9HB19 425 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 RXFP3Q9NSD7 469 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 ABHD10Q9NUJ1 306 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 FOXJ2Q9P0K8 574 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
TRAPPC13-205ENST00000504243 EPB41L2O43491 1005 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 HEXIM1O94992 359 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 ITPKBP27987 946 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 DUSP1P28562 367 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 SLC8A1P32418 973 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 MCM2P49736 904 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 RARRES1P49788 294 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 AGTR2P50052 363 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 CDK7P50613 346 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 WDR5P61964 334 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 CFHR3Q02985 330 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 COL10A1Q03692 680 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 G3BP1Q13283 466 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 EFR3AQ14156 821 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 KCNB1Q14721 858 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 ZNF484Q5JVG2 852 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 TRIM72Q6ZMU5 477 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 AMIGO2Q86SJ2 522 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 CPOQ8IVL8 374 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 NAXEQ8NCW5 288 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 CLEC4CQ8WTT0 213 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 GLMPQ8WWB7 406 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 EDC3Q96F86 508 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 DUSP26Q9BV47 211 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 PDE11AQ9HCR9 933 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 KCNK9Q9NPC2 374 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 PDP2Q9P2J9 529 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 DNAJC16Q9Y2G8 782 aa5.53□□□□□ -1.52
TRAPPC13-205ENST00000504243 FAM90A20PA6NIJ5 464 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 MBD3L5A6NJ08 208 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 SMIM22K7EJ46 135 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 EYA2O00167 538 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 HNRNPRO43390 633 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 ANP32CO43423 234 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 MT-CO3P00414 261 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 CYP21A2P08686 494 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 TLE3Q04726 772 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 MAPK7Q13164 816 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 TBX2Q13207 712 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 SMN1Q16637 294 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 ANKS1BQ7Z6G8 1248 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 HEATR4Q86WZ0 1026 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 SIMC1Q8NDZ2 872 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 LINS1Q8NG48 757 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 KCNJ9Q92806 393 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 ARRDC3Q96B67 414 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 HVCN1Q96D96 273 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 MPP4Q96JB8 637 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 THAP7Q9BT49 309 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 TRIM2Q9C040 744 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 CLPBQ9H078 707 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 ABHD16BQ9H3Z7 469 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 ASB6Q9NWX5 421 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 SLC17A6Q9P2U8 582 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 C11orf21Q9P2W6 132 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 TLK1Q9UKI8 766 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 FZD4Q9ULV1 537 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 KAT6AQ92794 2004 aa5.52□□□□□ -1.53
TRAPPC13-205ENST00000504243 C3orf70A6NLC5 250 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 MGST3O14880 152 aa5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 KLK10O43240 276 aa5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 APEHP13798 732 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 TLE2Q04725 743 aa5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 TMEM63BQ5T3F8 832 aa5.51□□□□□ -1.53
TRAPPC13-205ENST00000504243 VSTM1Q6UX27 236 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms