RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HSP90AA5PQ58FG0 334 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TJAP1Q5JTD0 557 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD40Q6AI12 368 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SDE2Q6IQ49 451 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP1R2P3Q6NXS1 205 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KLHDC10Q6PID8 442 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC149Q6ZUS6 474 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC116Q8IYX3 515 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF540Q8NDQ6 660 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CASP10Q92851 521 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CAVIN3Q969G5 261 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 VCPIP1Q96JH7 1222 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 NLRP4Q96MN2 994 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 VPS35Q96QK1 796 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CSRNP1Q96S65 589 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GAS2L1Q99501 681 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 APBA2Q99767 749 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PRMT1Q99873 361 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 C9orf16Q9BUW7 83 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SH2D4AQ9H788 454 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TDRD3Q9H7E2 651 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KIAA1586Q9HCI6 787 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 UBN1Q9NPG3 1134 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 STARD7Q9NQZ5 370 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RBM12Q9NTZ6 932 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SERPINB13Q9UIV8 391 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ZFP69BQ9UJL9 534 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TLK1Q9UKI8 766 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD6Q9Y2G4 727 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TRPM7Q96QT4 1865 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L5A8MUK1 530 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GOLGA8TH3BQL2 631 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF225M0QZC1 329 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RTCAO00442 366 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 COPEO14579 308 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RBBP9O75884 186 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 DDAH1O94760 285 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TTC4O95801 387 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 HMOX2P30519 316 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 OXTRP30559 389 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CASP7P55210 303 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 STK4Q13043 487 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 MRPL28Q13084 256 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SPARCL1Q14515 664 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 DRAP1Q14919 205 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ALX1Q15699 326 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ECM1Q16610 540 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SMTNL2Q2TAL5 461 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 MANEAQ5SRI9 462 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GRAMD4Q6IC98 578 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GPR153Q6NV75 609 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 FBXL19Q6PCT2 694 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 IFNEQ86WN2 208 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ENAHQ8N8S7 591 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 LHFPL5Q8TAF8 219 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 USP6NLQ92738 828 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP6V1G3Q96LB4 118 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TM9SF2Q99805 663 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM55Q9BYV6 548 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CUEDC2Q9H467 287 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 IFT22Q9H7X7 185 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP39A1Q9NYL5 469 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ADA2Q9NZK5 511 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM8A1Q9UBU6 413 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PNMA3Q9UL41 463 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ERVK-11Q9UQG0 969 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CEPT1Q9Y6K0 416 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PRRC2BQ5JSZ5 2229 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC9B1P1A6NJY1 282 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 B8ZZF3 427 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 K7EPI3 171 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 VWA5AO00534 786 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CBFA2T3O75081 653 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 JRKO75564 520 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 UBTFL6P0CB48 400 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ZBTB48P10074 688 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 SYN1P17600 705 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP2C18P33260 490 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GNL1P36915 607 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PBX1P40424 430 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 MAGEA11P43364 429 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RFX5P48382 616 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGDIAP52565 204 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CDR2Q01850 454 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TAGLNQ01995 201 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 UBE3AQ05086 875 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 NFIAQ12857 509 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GPS1Q13098 491 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNC3Q14003 757 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC85BQ15834 202 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KYNUQ16719 465 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KYAT1Q16773 422 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RTP2Q5QGT7 225 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GTF2IRD2BQ6EKJ0 949 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC137Q6PK04 289 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TMEM270Q6UE05 265 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 UGT2A3Q6UWM9 527 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GTF2IRD2Q86UP8 949 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms