RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 HOXD12P35452 270 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 MTIF2P46199 727 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 RPL34P49207 117 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 GFPT1Q06210 699 aaPredicted RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 RING1Q06587 406 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 ARHGAP44Q17R89 818 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 DUOXA1Q1HG43 343 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 MPP7Q5T2T1 576 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 SYCP2LQ5T4T6 812 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 TRIM65Q6PJ69 517 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 RABEPKQ7Z6M1 372 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 TMEM110Q86TL2 294 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 METTL3Q86U44 580 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 ZNF557Q8N988 423 aaPredicted RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 CLEC4CQ8WTT0 213 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 FOXJ1Q92949 421 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 FAM149B1Q96BN6 582 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 EVLQ9UI08 416 aaPredicted RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 PILRBQ9UKJ0 227 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 SLC6A14Q9UN76 642 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 IGHV1OR15-9A0A0B4J2B8 117 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 GOLGA6L7A0A1B0GV03 622 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 TYW5A2RUC4 315 aaKnown RBP12.43□□□□□ -0.42
MED28-203ENST00000503945 THAP12O43422 761 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ACSL4O60488 711 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 EPHX1P07099 455 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ACADMP11310 421 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 HOXD9P28356 352 aaPredicted RBP12.43□□□□□ -0.42
MED28-203ENST00000503945 CD6P30203 668 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 GNA15P30679 374 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 IL12RB1P42701 662 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ATXN3P54252 364 aaPredicted RBP12.43□□□□□ -0.42
MED28-203ENST00000503945 SNX16P57768 344 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 YWHAZP63104 245 aaKnown RBP12.43□□□□□ -0.42
MED28-203ENST00000503945 PTK2Q05397 1052 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ENPP2Q13822 863 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ZNF234Q14588 700 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 MEA1Q16626 185 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 FUT11Q495W5 492 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 PIK3R6Q5UE93 754 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 DENND1BQ6P3S1 775 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SLC23A3Q6PIS1 610 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SERPINA13PQ6UXR4 307 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 BEND5Q7L4P6 421 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 RGL4Q8IZJ4 473 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 WFIKKN2Q8TEU8 576 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 PRCCQ92733 491 aaPredicted RBP12.43□□□□□ -0.42
MED28-203ENST00000503945 GATA6Q92908 595 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SIPA1Q96FS4 1042 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 NUP58Q9BVL2 599 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SLC6A17Q9H1V8 727 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 TLR6Q9Y2C9 796 aa12.43□□□□□ -0.42
MED28-203ENST00000503945 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
MED28-203ENST00000503945 TBL1XO60907 577 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 IGLV3-27P01718 113 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 CFIP05156 583 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 FYNP06241 537 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 SERPINF2P08697 491 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
MED28-203ENST00000503945 GNSP15586 552 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 ENGP17813 658 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 POLR2EP19388 210 aaKnown RBP12.42□□□□□ -0.42
MED28-203ENST00000503945 PON1P27169 355 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
MED28-203ENST00000503945 HLA-FP30511 346 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 MAPK8P45983 427 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 TMEM215Q68D42 235 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 SMYD5Q6GMV2 418 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 CHST9Q7L1S5 443 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 IRF2BP1Q8IU81 584 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 AHI1Q8N157 1196 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 FIBINQ8TAL6 211 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 SORCS1Q8WY21 1168 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 NOX5Q96PH1 765 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 MKRN2Q9H000 416 aaKnown RBP12.42□□□□□ -0.42
MED28-203ENST00000503945 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 POPDC2Q9HBU9 364 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 ABCB8Q9NUT2 735 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 STIM2Q9P246 746 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
MED28-203ENST00000503945 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms