RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 CCDC12Q8WUD4 166 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-201ENST00000501177 FAM3CQ92520 227 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 MAP4K1Q92918 833 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 PGBD1Q96JS3 809 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 NLRP4Q96MN2 994 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 DPYSL5Q9BPU6 564 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 LSM14BQ9BX40 385 aaKnown RBP6.54□□□□□ -1.36
CRNDE-201ENST00000501177 BRD9Q9H8M2 597 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 RXFP3Q9NSD7 469 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 SUCLA2Q9P2R7 463 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-201ENST00000501177 CBLCQ9ULV8 474 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 NDRG2Q9UN36 371 aaKnown RBP6.54□□□□□ -1.36
CRNDE-201ENST00000501177 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 EML5Q05BV3 1969 aa6.54□□□□□ -1.36
CRNDE-201ENST00000501177 SETXQ7Z333 2677 aaKnown RBP6.54□□□□□ -1.36
CRNDE-201ENST00000501177 CCDC163A0A0D9SF12 145 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 hCG_1642624A0A1W2PR95 340 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PRC1O43663 620 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 GAS7O60861 476 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MAFO75444 373 aaPredicted RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 AKAP3O75969 853 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 ERLIN2O94905 339 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MYBP10242 640 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PYGMP11217 842 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MLH1P40692 756 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 HMGN5P82970 282 aaKnown RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PAK1Q13153 545 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 DUSP8Q13202 625 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 DRP2Q13474 957 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PRKD1Q15139 912 aaPredicted RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 GPR19Q15760 415 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PSMD5Q16401 504 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PRR16Q569H4 304 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 FAM209AQ5JX71 171 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 STPG1Q5TH74 334 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MICU3Q86XE3 530 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 ITFG1Q8TB96 612 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 SLC7A14Q8TBB6 771 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 DEPDC1BQ8WUY9 529 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PPP1R9BQ96SB3 815 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 TTPALQ9BTX7 342 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 TRMT61BQ9BVS5 477 aaKnown RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 TEKT3Q9BXF9 490 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 IFT122Q9HBG6 1241 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 ZFP14Q9HCL3 533 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 PCNX2A6NKB5 2137 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 NUP210Q8TEM1 1887 aaPredicted RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 LAMA1P25391 3075 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 ACACAQ13085 2346 aa6.53□□□□□ -1.36
CRNDE-201ENST00000501177 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
CRNDE-201ENST00000501177 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SHISA7A6NL88 538 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SRRM3A6NNA2 597 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 TAF4O00268 1085 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 KCNK3O14649 394 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 ZNF197O14709 1029 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 CCL16O15467 120 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 ASAP2O43150 1006 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 TADA2AO75478 443 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 RPL17P18621 184 aaKnown RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 RXRAP19793 462 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 GNA11P29992 359 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 MC4RP32245 332 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 FNTBP49356 437 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SCNN1GP51170 649 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 RCAN1P53805 252 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 JAM2P57087 298 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 RAC3P60763 192 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 NTHL1P78549 312 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 IL13RA1P78552 427 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SATB1Q01826 763 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 DMTNQ08495 405 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 UGCGQ16739 394 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 DGKKQ5KSL6 1271 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 LARP4Q71RC2 724 aaKnown RBP eCLIP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 CACNA2D4Q7Z3S7 1137 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SMC5Q8IY18 1101 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 BICD2Q8TD16 824 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 PSPC1Q8WXF1 523 aaKnown RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 LENG9Q96B70 501 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 ZNF669Q96BR6 464 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-201ENST00000501177 GAD1Q99259 594 aa6.52□□□□□ -1.37
CRNDE-201ENST00000501177 CLSTN3Q9BQT9 956 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms