RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 WNT9AO14904 365 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 VILLO15195 856 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 TIMM44O43615 452 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 STX6O43752 255 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 DFNA5O60443 496 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 TRIM21P19474 475 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 CD38P28907 300 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 HLA-FP30511 346 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 ACTN2P35609 894 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 PSEN1P49768 467 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 GALCP54803 685 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 RACK1P63244 317 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 TLE3Q04726 772 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 EHHADHQ08426 723 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 RTP5Q14D33 572 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 ZNF776Q68DI1 518 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 FBXL19Q6PCT2 694 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 NCEH1Q6PIU2 408 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 ZC3H3Q8IXZ2 948 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 LSM14AQ8ND56 463 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 HNRNPABQ99729 332 aaKnown RBP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 ORAI3Q9BRQ5 295 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC171-209ENST00000498725 SLC2A11Q9BYW1 496 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 TNMDQ9H2S6 317 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 EBF2Q9HAK2 575 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 SGK2Q9HBY8 427 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 FBXL12Q9NXK8 326 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 SERGEFQ9UGK8 458 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 STRIP2Q9ULQ0 834 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 PCDHGA1Q9Y5H4 931 aa9.53□□□□□ -0.88
CCDC171-209ENST00000498725 A0A1W2PP55 124 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 A0A1W2PPC4 97 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 MID1O15344 667 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 PAPSS1O43252 624 aaPredicted RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SDC3O75056 442 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 RNASEH2AO75792 299 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 C1SP09871 688 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 PABPC1P11940 636 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 ASPAP45381 313 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 NUMBP49757 651 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SGSHP51688 502 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 BROXQ5VW32 411 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 DHX40Q8IX18 779 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 CPXM2Q8N436 756 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SAP25Q8TEE9 199 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SKA1Q96BD8 255 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 USP28Q96RU2 1077 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 CDK5RAP1Q96SZ6 601 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 OMDQ99983 421 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SEMA4CQ9C0C4 833 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 GDF3Q9NR23 364 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 STIM2Q9P246 746 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 TFIP11Q9UBB9 837 aaKnown RBP9.52□□□□□ -0.89
CCDC171-209ENST00000498725 SFMBT1Q9UHJ3 866 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 CLCA2Q9UQC9 943 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 UBE4BO95155 1302 aa9.52□□□□□ -0.89
CCDC171-209ENST00000498725 ARHGAP6O43182 974 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 TBL1XO60907 577 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 SIN3BO75182 1162 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 EPHA8P29322 1005 aaPredicted RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 CD70P32970 193 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 AFMP43652 599 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 AP3M2P53677 418 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 AMPD3Q01432 767 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 ZBTB16Q05516 673 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 SLC39A14Q15043 492 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 STK38Q15208 465 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 KNOP1Q1ED39 458 aaKnown RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D25Q3MII6 688 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms