RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	FCRL2	Q96LA5	508 aa	Predicted RBP	10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	HHIP	Q96QV1	700 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	HINFP	Q9BQA5	517 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	C2orf42	Q9NWW7	574 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	DDIT4	Q9NX09	232 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	NCDN	Q9UBB6	729 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	TJP2	Q9UDY2	1190 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	NOCT	Q9UK39	431 aa	Known RBP	10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	GMEB2	Q9UKD1	530 aa		10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	SMG5	Q9UPR3	1016 aa	Known RBP	10.92	□□□□□ -0.66
FXR1-222	ENST00000498658	PRRT4	C9JH25	899 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	DAB1	O75553	588 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	HOXD9	P28356	352 aa	Predicted RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	NOMO3	P69849	1222 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	MESP2	Q0VG99	397 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	EIF4EBP2	Q13542	120 aa	Predicted RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	USP39	Q53GS9	565 aa	Known RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	PIK3R6	Q5UE93	754 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	LAIR1	Q6GTX8	287 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	RASSF3	Q86WH2	238 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	AHI1	Q8N157	1196 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	ADAM32	Q8TC27	787 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	RNF34	Q969K3	372 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	PIWIL1	Q96J94	861 aa	Known RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	LOXL4	Q96JB6	756 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	PPP1R9B	Q96SB3	815 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	EDEM3	Q9BZQ6	932 aa		10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658	RIF1	Q5UIP0	2472 aa	Known RBP	10.91	□□□□□ -0.66
FXR1-222	ENST00000498658		A0A1B0GTH6	734 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	KCNU1	A8MYU2	1149 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	SGK1	O00141	431 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	TRIM24	O15164	1050 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	EPHB6	O15197	1021 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	HR	O43593	1189 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	FOXD2	O60548	495 aa	Predicted RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	TSPAN3	O60637	253 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	TBL1X	O60907	577 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ADAM23	O75077	832 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	GRAP2	O75791	330 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	CYP1A1	P04798	512 aa	Predicted RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	TPM3	P06753	285 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	HOXB2	P14652	356 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	MMP8	P22894	467 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	NSF	P46459	744 aa	Known RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	OXCT1	P55809	520 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	DMWD	Q09019	674 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	STARD3	Q14849	445 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	TAF5	Q15542	800 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ZSCAN23	Q3MJ62	389 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	FAM133B	Q5BKY9	247 aa	Known RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	MS4A13	Q5J8X5	152 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	BRMS1L	Q5PSV4	323 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	RABGAP1L	Q5R372	815 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	EMC10	Q5UCC4	262 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	NAA35	Q5VZE5	725 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ANO7	Q6IWH7	933 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	PRR23B	Q6ZRT6	265 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	XYLT1	Q86Y38	959 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	SFTPA1	Q8IWL2	248 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	CPA5	Q8WXQ8	436 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	IQCD	Q96DY2	449 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ZC3H10	Q96K80	434 aa	Known RBP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	SPACA7	Q96KW9	195 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	GABRG3	Q99928	467 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	NUP58	Q9BVL2	599 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	CBX8	Q9HC52	389 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	ELOVL2	Q9NXB9	296 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	PLA2G4C	Q9UP65	541 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	FAM186A	A6NE01	2351 aa		10.9	□□□□□ -0.66
FXR1-222	ENST00000498658	FRYL	O94915	3013 aa		10.9	□□□□□ -0.67
FXR1-222	ENST00000498658	MYO18A	Q92614	2054 aa	Known RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	PTPRZ1	P23471	2315 aa	Predicted RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658		F5H5T6	163 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658		M0QYT0	321 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	LRP3	O75074	770 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	RHOBTB1	O94844	696 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	MOCS2	O96007	188 aa	Predicted RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	CALB1	P05937	261 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	ATP5B	P06576	529 aa	Known RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	RET	P07949	1114 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	PABPC1	P11940	636 aa	Known RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	UNG	P13051	313 aa	Predicted RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	SLC6A4	P31645	630 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	PXN	P49023	591 aa	Predicted RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	RNASE9	P60153	205 aa	Known RBP	10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	FMO1	Q01740	532 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	CENPC	Q03188	943 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	NME3	Q13232	169 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	CDH18	Q13634	790 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	NR1I3	Q14994	352 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	ELF2	Q15723	593 aa		10.89	□□□□□ -0.67
FXR1-222	ENST00000498658	GEN1	Q17RS7	908 aa		10.89	□□□□□ -0.67

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