RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SMC1AQ14683 1233 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 PDK2Q15119 407 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CCNG2Q16589 344 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 USP41Q3LFD5 358 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 MAP9Q49MG5 647 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CTXN3Q4LDR2 81 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 ATP13A4Q4VNC1 1196 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 SLC39A12Q504Y0 691 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 TXNRD3NBQ6F5E7 133 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 MFSD7Q6UXD7 560 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CCNI2Q6ZMN8 369 aaPredicted RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 SYDE1Q6ZW31 735 aaPredicted RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 BHLHA9Q7RTU4 235 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CCDC50Q8IVM0 306 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 KLHL7Q8IXQ5 586 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 GPR65Q8IYL9 337 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 FAM172AQ8WUF8 416 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 HDAC7Q8WUI4 952 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 RAPGEF5Q92565 580 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PGAP3Q96FM1 320 aaPredicted RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 IGSF21Q96ID5 467 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CFAP57Q96MR6 1250 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PEBP4Q96S96 227 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 TMEM209Q96SK2 561 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 SLC9A7Q96T83 725 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 NPY6RQ99463 290 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 TTPALQ9BTX7 342 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 ULBP1Q9BZM6 244 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 UBE2OQ9C0C9 1292 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 MCOLN1Q9GZU1 580 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 DDX47Q9H0S4 455 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 PRDM16Q9HAZ2 1276 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 ARFGAP3Q9NP61 516 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PRDM5Q9NQX1 630 aaPredicted RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 ENAMQ9NRM1 1142 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CHST7Q9NS84 486 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 DZANK1Q9NVP4 752 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 COMMD8Q9NX08 183 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 DNAJB12Q9NXW2 375 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 IL37Q9NZH6 218 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 STK39Q9UEW8 545 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 STAP1Q9ULZ2 295 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 BACE2Q9Y5Z0 518 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 NLRC5Q86WI3 1866 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PTPRDP23468 1912 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 KIAA0100Q14667 2235 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 PATJQ8NI35 1801 aa7.96□□□□□ -1.13
CDC42-205ENST00000498236 FAM92AA1XBS5 289 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 LRRD1A4D1F6 860 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 YJEFN3A6XGL0 299 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 E7ENQ6 273 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 HEXIM1O94992 359 aaKnown RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 LTFP02788 710 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 FYNP06241 537 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 ACPPP15309 386 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 LAG3P18627 525 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 GBP1P32455 592 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 COILP38432 576 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 NDUFV1P49821 464 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 PCBP4P57723 403 aaKnown RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 ATP11AP98196 1134 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 DR1Q01658 176 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 SRSF11Q05519 484 aaKnown RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 PPIGQ13427 754 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDC42-205ENST00000498236 GAS6Q14393 721 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 DPYSL2Q16555 572 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 C15orf59Q2T9L4 293 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 ODF2Q5BJF6 829 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 RTP2Q5QGT7 225 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 BEND6Q5SZJ8 279 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 OTUD1Q5VV17 481 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 SLC8B1Q6J4K2 584 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 KCNT2Q6UVM3 1135 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 TMCO3Q6UWJ1 677 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 BBS12Q6ZW61 710 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 GPRIN1Q7Z2K8 1008 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 ANKS1BQ7Z6G8 1248 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 TMEM173Q86WV6 379 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 DEFB106AQ8N104 65 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 SLC39A11Q8N1S5 342 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 SPPL2BQ8TCT7 592 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 GRK7Q8WTQ7 553 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 BCL7CQ8WUZ0 217 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 MAGOHBQ96A72 148 aaKnown RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 FAF2Q96CS3 445 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 SPATA17Q96L03 361 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 ZNF558Q96NG5 402 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 HERPUD2Q9BSE4 406 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 RHOBTB2Q9BYZ6 727 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 FAM129AQ9BZQ8 928 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 DCLK3Q9C098 648 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 RAB17Q9H0T7 212 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 ZWILCHQ9H900 591 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 NGRNQ9NPE2 291 aaKnown RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 RCOR3Q9P2K3 495 aaPredicted RBP7.96□□□□□ -1.14
CDC42-205ENST00000498236 HSFX1Q9UBD0 423 aa7.96□□□□□ -1.14
CDC42-205ENST00000498236 MTRRQ9UBK8 725 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms