RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 IGLV3-25P01717 112 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 CYP1A1P04798 512 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 SLC2A3P11169 496 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 NTSR1P30989 418 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 CCR1P32246 355 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 MATKP42679 507 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 NSFP46459 744 aaKnown RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 SULT1E1P49888 294 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 UBASH3AP57075 661 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 SIM2Q14190 667 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 LPAL2Q16609 132 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 GEN1Q17RS7 908 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 RAP1GAP2Q684P5 730 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 ANO7Q6IWH7 933 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 TMEM92Q6UXU6 159 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 PGBD3Q8N328 593 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 TPSD1Q9BZJ3 242 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 CIPCQ9C0C6 399 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 RRN3Q9NYV6 651 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 BCCIPQ9P287 314 aaKnown RBP eCLIP17.33■□□□□ 0.36
ABCF3-218ENST00000498136 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 STARD13Q9Y3M8 1113 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 USP34Q70CQ2 3546 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 EML5Q05BV3 1969 aa17.33■□□□□ 0.36
ABCF3-218ENST00000498136 CCDC163A0A0D9SF12 145 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 HRO43593 1189 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 ADAM23O75077 832 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 RPP40O75818 363 aaKnown RBP17.32■□□□□ 0.36
ABCF3-218ENST00000498136 HOXB2P14652 356 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 SCNN1AP37088 669 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 NR1I3Q14994 352 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
ABCF3-218ENST00000498136 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 MFN1Q8IWA4 741 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 LGI2Q8N0V4 545 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 ERLEC1Q96DZ1 483 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 ACOX2Q99424 681 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 AGPAT1Q99943 283 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 METTL5Q9NRN9 209 aaKnown RBP17.32■□□□□ 0.36
ABCF3-218ENST00000498136 ABCB8Q9NUT2 735 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
ABCF3-218ENST00000498136 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
ABCF3-218ENST00000498136 TCRBV21S2A2A0A5A6 115 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 LRRC53A6NM62 1247 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 KCNU1A8MYU2 1149 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 F5H5T6 163 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 GFRA2O00451 464 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 TACR2P21452 398 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 RPS24P62847 133 aaKnown RBP17.31■□□□□ 0.36
ABCF3-218ENST00000498136 DEUP1Q05D60 604 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ASIC2Q16515 512 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 CLEC16AQ2KHT3 1053 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 MPP7Q5T2T1 576 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-218ENST00000498136 CFAP52Q8N1V2 620 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ZNF557Q8N988 423 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-218ENST00000498136 HMGB4Q8WW32 186 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 PRICKLE1Q96MT3 831 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-218ENST00000498136 PCDHB18PQ96TA0 734 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 IRX2Q9BZI1 471 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-218ENST00000498136 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ELOVL2Q9NXB9 296 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 CACNA2D2Q9NY47 1150 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ADAM22Q9P0K1 906 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 EBF1Q9UH73 591 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 GGA2Q9UJY4 613 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 HCN2Q9UL51 889 aa17.31■□□□□ 0.36
ABCF3-218ENST00000498136 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-218ENST00000498136 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-218ENST00000498136 UNGP13051 313 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-218ENST00000498136 HNRNPLP14866 589 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABCF3-218ENST00000498136 MMP8P22894 467 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 HLA-FP30511 346 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 FLT3P36888 993 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 CENPCQ03188 943 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 CDH18Q13634 790 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
ABCF3-218ENST00000498136 E2F5Q15329 346 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 SFMBT2Q5VUG0 894 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 MDGA1Q8NFP4 955 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 WFDC5Q8TCV5 224 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 GAB3Q8WWW8 586 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 BAP1Q92560 729 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 RUBCNQ92622 972 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 MYEOVQ96EZ4 313 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 TBCBQ99426 244 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 NPY6RQ99463 290 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 WDCPQ9H6R7 721 aa17.3■□□□□ 0.36
ABCF3-218ENST00000498136 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms