RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KAT7O95251 611 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 NOS2P35228 1153 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 SLC11A2P49281 568 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 GSCP56915 257 aaPredicted RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 ZBED6P86452 979 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 CDK17Q00537 523 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 KDSRQ06136 332 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 FAM133BQ5BKY9 247 aaKnown RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 FYB2Q5VWT5 728 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 MON1BQ7L1V2 547 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 ARCQ7LC44 396 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 MAML2Q8IZL2 1156 aaPredicted RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 SPEM1Q8N4L4 309 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 NAT16Q8N8M0 369 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 SYN2Q92777 582 aaPredicted RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 NT5C3BQ969T7 300 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 NPY6RQ99463 290 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 ARHGEF4Q9NR80 690 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 SEPT11Q9NVA2 429 aaKnown RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
ERCC8-208ENST00000497892 DDIT4Q9NX09 232 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 RRN3Q9NYV6 651 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 TMEM59LQ9UK28 342 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 STAP1Q9ULZ2 295 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 CAPN11Q9UMQ6 739 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 FANCMQ8IYD8 2048 aa11.68□□□□□ -0.54
ERCC8-208ENST00000497892 ATG2BQ96BY7 2078 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CHURC1-FNTBB4DL54 471 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 K7EQS6 105 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 LAMTOR5O43504 91 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 ACSL4O60488 711 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 APOEP02649 317 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CYBBP04839 570 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 APODP05090 189 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CALB1P05937 261 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 SLC6A4P31645 630 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 GBP1P32455 592 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 FLT3P36888 993 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 GRIA2P42262 883 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CCR3P51677 355 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 SLC25A52Q3SY17 297 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PREPLQ4J6C6 727 aaPredicted RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 MPPE1Q53F39 396 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 ZC3H12AQ5D1E8 599 aaKnown RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 SPECC1LQ69YQ0 1117 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 NADSYN1Q6IA69 706 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 GRAMD4Q6IC98 578 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 TRNP1Q6NT89 227 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PPP1R2P3Q6NXS1 205 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PKN3Q6P5Z2 889 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 ZNF571Q7Z3V5 609 aaPredicted RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 TERB1Q8NA31 727 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 BHMTQ93088 406 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 IRF2BPLQ9H1B7 796 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 METTL5Q9NRN9 209 aaKnown RBP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 PLK2Q9NYY3 685 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.67□□□□□ -0.54
ERCC8-208ENST00000497892 ADAM22Q9P0K1 906 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 FBXO10Q9UK96 956 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 MYO15AQ9UKN7 3530 aa11.67□□□□□ -0.54
ERCC8-208ENST00000497892 KCNU1A8MYU2 1149 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 H0Y858 1186 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 M0QYT0 321 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 TRIM24O15164 1050 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 ATG13O75143 517 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 MOCS2O96007 188 aaPredicted RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SLC2A3P11169 496 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 TFE3P19532 575 aaPredicted RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 HOXD9P28356 352 aaPredicted RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 CCR1P32246 355 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 DGKGP49619 791 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SULT1E1P49888 294 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SATB1Q01826 763 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 KLHL30Q0D2K2 578 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 NME3Q13232 169 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 MTA1Q13330 715 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 TRIM14Q14142 442 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 ZNF528Q3MIS6 628 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 MPP7Q5T2T1 576 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 HGSNATQ68CP4 663 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 RNF43Q68DV7 783 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 ACAD10Q6JQN1 1059 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SARM1Q6SZW1 724 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SFTPA1Q8IWL2 248 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 DDI1Q8WTU0 396 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms