RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SLC43A1O75387 559 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 IPO13O94829 963 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 DDNO94850 711 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CD1AP06126 327 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ANXA2P07355 339 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RAP2AP10114 183 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 HK1P19367 917 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC6A2P23975 617 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CHMP24386 653 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ACRV1P26436 265 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 PRDX5P30044 214 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 KIF5BP33176 963 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ATP6V1E1P36543 226 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CCT4P50991 539 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CCR9P51686 369 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 HSD17B7P56937 341 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ARF3P61204 181 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TMF1P82094 1093 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ARF1P84077 181 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 SLFN5Q08AF3 891 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TOB2Q14106 344 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RRP1BQ14684 758 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CTXN3Q4LDR2 81 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 THEMIS2Q5TEJ8 643 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RRAGBQ5VZM2 374 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ZNF529Q6P280 563 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 FBXO38Q6PIJ6 1188 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CPLX2Q6PUV4 134 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 UNC5DQ6UXZ4 953 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CATSPERGQ6ZRH7 1159 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 LRRC55Q6ZSA7 311 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 BBS12Q6ZW61 710 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TMTC3Q6ZXV5 915 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 BEND5Q7L4P6 421 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CATSPER4Q7RTX7 472 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RSPH3Q86UC2 560 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 LCA5Q86VQ0 697 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 PPP1R3BQ86XI6 285 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ERC1Q8IUD2 1116 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 AVL9Q8NBF6 648 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 C3orf20Q8ND61 904 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 LILRB1Q8NHL6 650 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CEP70Q8NHQ1 597 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 GOT1L1Q8NHS2 421 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 KCNG4Q8TDN1 519 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 THAP4Q8WY91 577 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ATP2A3Q93084 1043 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CENPTQ96BT3 561 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 MTFMTQ96DP5 389 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 SNX22Q96L94 193 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TWNKQ96RR1 684 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ADOQ96SZ5 270 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 MNTQ99583 582 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 NCAPGQ9BPX3 1015 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 HTATIP2Q9BUP3 242 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RNPEPQ9H4A4 650 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ACAD9Q9H845 621 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 SAYSD1Q9NPB0 183 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 DIAPH3Q9NSV4 1193 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 PDRG1Q9NUG6 133 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 MTRRQ9UBK8 725 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TBK1Q9UHD2 729 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 RPS6KA6Q9UK32 745 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 PCDHA6Q9UN73 950 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TRPM1Q7Z4N2 1603 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 DMDP11532 3685 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 POLQO75417 2590 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 ACEP12821 1306 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 CCDC196A0A1B0GTZ2 297 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 MARCH11A6NNE9 402 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 GOLGA6L6A8MZA4 724 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 AHRRA9YTQ3 701 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 ERAL1O75616 437 aaKnown RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 CAMTA2O94983 1202 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 MATN4O95460 622 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC4A1P02730 911 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 MT-ND5P03915 603 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 ATF7P17544 494 aaPredicted RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 RXRAP19793 462 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 KCNA3P22001 575 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 FGFR4P22455 802 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 ABCD3P28288 659 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 GABRB3P28472 473 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 ACSL1P33121 698 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 CD86P42081 329 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 PDE6CP51160 858 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 RNASE9P60153 205 aaKnown RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC25A3Q00325 362 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 PPARDQ03181 441 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 PTH1RQ03431 593 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 ACVR2BQ13705 512 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 UBXN2BQ14CS0 331 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 WTAPQ15007 396 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 PTPN14Q15678 1187 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 MMEL1Q495T6 779 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 PABPC1LQ4VXU2 614 aaKnown RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 ATXN7L2Q5T6C5 722 aaPredicted RBP4□□□□□ -1.77
EXOSC3-208ENST00000496910 MAP3K21Q5TCX8 1036 aa4□□□□□ -1.77
EXOSC3-208ENST00000496910 TATDN1Q6P1N9 297 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms