RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	C10orf76	Q5T2E6	689 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	TAC4	Q86UU9	113 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	LONP2	Q86WA8	852 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	XYLT1	Q86Y38	959 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	ZNF557	Q8N988	423 aa	Predicted RBP	12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	SLC20A1	Q8WUM9	679 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	CPA5	Q8WXQ8	436 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	BAP1	Q92560	729 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	NUP58	Q9BVL2	599 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	REPIN1	Q9BWE0	567 aa	Known RBP	12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	C2orf42	Q9NWW7	574 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	PLK2	Q9NYY3	685 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	SLC12A6	Q9UHW9	1150 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	MMP17	Q9ULZ9	603 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899		R4GN57	208 aa		12.85	□□□□□ -0.35
MRPL55-233	ENST00000495899	TIMM44	O43615	452 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	DAB1	O75553	588 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	F9	P00740	461 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	UNG	P13051	313 aa	Predicted RBP	12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	CCR1	P32246	355 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	DGKE	P52429	567 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	UBASH3A	P57075	661 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	ARID5A	Q03989	594 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	DMC1	Q14565	340 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	NFKBIB	Q15653	356 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	FAM133B	Q5BKY9	247 aa	Known RBP	12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	EOGT	Q5NDL2	527 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	PIK3R6	Q5UE93	754 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	NAA35	Q5VZE5	725 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	RNF43	Q68DV7	783 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	IRF2BP2	Q7Z5L9	587 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	SFTPA1	Q8IWL2	248 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	IL17RC	Q8NAC3	791 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	ADAM32	Q8TC27	787 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	BHMT	Q93088	406 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	NT5C3B	Q969T7	300 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	IQCD	Q96DY2	449 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	PGAP3	Q96FM1	320 aa	Predicted RBP	12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	P2RY11	Q96G91	374 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	BTN2A3P	Q96KV6	586 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	AGPAT1	Q99943	283 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	FAM204A	Q9H8W3	233 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	DDIT4	Q9NX09	232 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	AIPL1	Q9NZN9	384 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	EBF1	Q9UH73	591 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	STAP1	Q9ULZ2	295 aa		12.84	□□□□□ -0.35
MRPL55-233	ENST00000495899	KCNU1	A8MYU2	1149 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	NPC1	O15118	1278 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	TRIM24	O15164	1050 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	TSPAN3	O60637	253 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	GRAP2	O75791	330 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	APBB3	O95704	486 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	LMNA	P02545	664 aa	Known RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ABCB4	P21439	1286 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	HOXD9	P28356	352 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	NSF	P46459	744 aa	Known RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	MRE11	P49959	708 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	CENPC	Q03188	943 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	EIF4H	Q15056	248 aa	Known RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	CRY1	Q16526	586 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	CLEC16A	Q2KHT3	1053 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	SLC25A52	Q3SY17	297 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	EMC10	Q5UCC4	262 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	PPP1R2P3	Q6NXS1	205 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	LRSAM1	Q6UWE0	723 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	WDR5B	Q86VZ2	330 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	PHF13	Q86YI8	300 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ALLC	Q8N6M5	410 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ZNF513	Q8N8E2	541 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	ATP6V0D2	Q8N8Y2	350 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	NPY6R	Q99463	290 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	FAM117A	Q9C073	453 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	NUCKS1	Q9H1E3	243 aa	Known RBP	12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	EPC1	Q9H2F5	836 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	TSPY26P	Q9H489	355 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	TMEM59L	Q9UK28	342 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	PAXBP1	Q9Y5B6	917 aa		12.83	□□□□□ -0.36
MRPL55-233	ENST00000495899	GOLGA6L7	A0A1B0GV03	622 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899		A0A1W2PQJ5	194 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	TYW5	A2RUC4	315 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	LRRC53	A6NM62	1247 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	PRRT4	C9JH25	899 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899		M0QYT0	321 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	KLF8	O95600	359 aa	Predicted RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	TPM3	P06753	285 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	NTSR1	P30989	418 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	SLC6A4	P31645	630 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	PBX1	P40424	430 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	FNTB	P49356	437 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	RNASE9	P60153	205 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	PITX1	P78337	314 aa	Predicted RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	MS4A13	Q5J8X5	152 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	SFMBT2	Q5VUG0	894 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	NADSYN1	Q6IA69	706 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	SDE2	Q6IQ49	451 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms