RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 A0A088AWK7 358 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ADM5C9JUS6 153 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 BIRC5O15392 142 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 NPTXRO95502 500 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PRKCGP05129 697 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 LMO2P25791 158 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 SLC1A6P48664 564 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PDE1BQ01064 536 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 WASHC5Q12768 1159 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 LBRQ14739 615 aaKnown RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PCLAFQ15004 111 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF618Q5T7W0 954 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PACS1Q6VY07 963 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 NET1Q7Z628 596 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 C10orf107Q8IVU9 208 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ARNTL2Q8WYA1 636 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 C11orf84Q9BUA3 381 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 XPNPEP3Q9NQH7 507 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 COX16Q9P0S2 106 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 CSADQ9Y600 493 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 MFSD11O43934 449 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 SMIM24O75264 130 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 ERVK-10P10266 1014 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 SERPINB9P50453 376 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 ARHGAP1Q07960 439 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 MYLK4Q86YV6 388 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 LINC01465Q8N7H1 131 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 SEPT10Q9P0V9 454 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 F8W8V4 182 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 PLIN3O60664 434 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 CIB2O75838 187 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 GSTA2P09210 222 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 MLH1P40692 756 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 KIZQ2M2Z5 673 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 TIFABQ6ZNK6 161 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 ARCQ7LC44 396 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 CMC1Q7Z7K0 106 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 CCNJLQ8IV13 435 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 WDR75Q8IWA0 830 aaKnown RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 GATA6Q92908 595 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-217ENST00000495688 TMEM216Q9P0N5 145 aa13.4□□□□□ -0.26
PTPN7-217ENST00000495688 BRCA1P38398 1863 aaKnown RBP13.4□□□□□ -0.27
PTPN7-217ENST00000495688 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 USP12O75317 370 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ZCCHC18P0CG32 403 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ABCG1P45844 678 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 EPHB1P54762 984 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 TNS4Q8IZW8 715 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 AFG1LQ8WV93 481 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 APBB2Q92870 758 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SORT1Q99523 831 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 CYP4F11Q9HBI6 524 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SYBUQ9NX95 663 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SCOCQ9UIL1 159 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SOX13Q9UN79 622 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 MAGED2Q9UNF1 606 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 A0A0A0MRY4 1105 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 RNF103O00237 685 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SIN3BO75182 1162 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ZMPSTE24O75844 475 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 KRT34O76011 436 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 PDE5AO76074 875 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ITGA2BP08514 1039 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 AOC1P19801 751 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 PSMB4P28070 264 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 PTPN9P43378 593 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 DNAL1Q4LDG9 190 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 MARK2Q7KZI7 788 aaKnown RBP13.39□□□□□ -0.27
PTPN7-217ENST00000495688 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 RAB3IL1Q8TBN0 382 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 P2RY11Q96G91 374 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 OLFM3Q96PB7 478 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 EIF2AQ9BY44 585 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms