RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 NOMO3P69849 1222 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NTHL1P78549 312 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ADIGQ0VDE8 80 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CBX2Q14781 532 aaPredicted RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LEXMQ3ZCV2 418 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ALKBH2Q6NS38 261 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PPP1R2P3Q6NXS1 205 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 BEND4Q6ZU67 534 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ZNF571Q7Z3V5 609 aaPredicted RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 WDTC1Q8N5D0 677 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PDZD8Q8NEN9 1154 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FEZF2Q8TBJ5 459 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 IPO4Q8TEX9 1081 aaKnown RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 OVCA2Q8WZ82 227 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FBXO32Q969P5 355 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NXPE3Q969Y0 559 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PPP1R13BQ96KQ4 1090 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SYT11Q9BT88 431 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LRRC3Q9BY71 257 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ZNF334Q9HCZ1 680 aaPredicted RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 WDR6Q9NNW5 1121 aaKnown RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CNGB3Q9NQW8 809 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 IL37Q9NZH6 218 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ARHGAP20Q9P2F6 1191 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 THEGQ9P2T0 379 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CYTH4Q9UIA0 394 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FAM50BQ9Y247 325 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 BRWD1Q9NSI6 2320 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NUP210Q8TEM1 1887 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SSU72P8A0A1W2PR75 194 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FAM92AA1XBS5 289 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 E5RJQ4 531 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FBXO21O94952 628 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ZBED1O96006 694 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PLEKP08567 350 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 UNGP13051 313 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NSFP46459 744 aaKnown RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PPP3CCP48454 512 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 RPL34P49207 117 aaKnown RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CDK17Q00537 523 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TAF10Q12962 218 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CLEC16AQ2KHT3 1053 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 AAK1Q2M2I8 961 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NAA35Q5VZE5 725 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 WDR59Q6PJI9 974 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CCDC186Q7Z3E2 898 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 VN1R5Q7Z5H4 357 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TMEM110Q86TL2 294 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SCML4Q8N228 414 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CPA5Q8WXQ8 436 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SUSD6Q92537 303 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PANX2Q96RD6 677 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CPXM1Q96SM3 734 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PCDHB18PQ96TA0 734 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.6□□□□□ -0.717e-8■■■■■ 29.7
RAB11FIP3-211ENST00000495663 ULBP1Q9BZM6 244 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MIS12Q9H081 205 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ATXN3LQ9H3M9 355 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 DEF6Q9H4E7 631 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SYNCQ9H7C4 482 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TLR8Q9NR97 1041 aaKnown RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TRPM5Q9NZQ8 1165 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CDH22Q9UJ99 828 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SCML2Q9UQR0 700 aa10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MRPS23Q9Y3D9 190 aaKnown RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NCANO14594 1321 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 C5orf42Q9H799 3197 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 VCANP13611 3396 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 KIAA1324LA8MWY0 1029 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 DDX3XO00571 662 aaKnown RBP eCLIP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ABL1P00519 1130 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GZMAP12544 262 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 EIF4A3P38919 411 aaKnown RBP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CCR2P41597 374 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GSDMDP57764 484 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 DAOAP59103 153 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TFF2Q03403 129 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ZNF211Q13398 564 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SLC5A9Q2M3M2 681 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PTPN20Q4JDL3 420 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ARHGAP15Q53QZ3 475 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ACAD10Q6JQN1 1059 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GAREM2Q75VX8 874 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GET4Q7L5D6 327 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MON1AQ86VX9 555 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ARHGAP18Q8N392 663 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SHKBP1Q8TBC3 707 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 IRGQQ8WZA9 623 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MRPS31Q92665 395 aaKnown RBP10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 C18orf8Q96DM3 657 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TCEAL4Q96EI5 215 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CCDC42Q96M95 316 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GMIPQ9P107 970 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms