RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ANTXRLA6NF34 631 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 I6L893 689 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 CCP110O43303 1012 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 TULP3O75386 442 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 ENDOD1O94919 500 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 PENKP01210 267 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 MYBL1P10243 752 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 SLC2A3P11169 496 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 CHRNB1P11230 501 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 TACR2P21452 398 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 AVPR2P30518 371 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 RDXP35241 583 aaKnown RBP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 GGCXP38435 758 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 PTPN9P43378 593 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 GALCP54803 685 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 PIK3R6Q5UE93 754 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 C1orf228Q6PIY5 440 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 SND1Q7KZF4 910 aaKnown RBP eCLIP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 ETFBKMTQ8IXQ9 262 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 FAM172AQ8WUF8 416 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 TMA16Q96EY4 203 aaKnown RBP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 TRIM11Q96F44 468 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 BTN2A3PQ96KV6 586 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 NELL2Q99435 816 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 DNAJC17Q9NVM6 304 aaKnown RBP20.15■□□□□ 0.82
HDAC4-212ENST00000495497 ARHGEF38Q9NXL2 777 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 SLC12A6Q9UHW9 1150 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 SNX10Q9Y5X0 201 aa20.15■□□□□ 0.82
HDAC4-212ENST00000495497 MYOFQ9NZM1 2061 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 ANKRD62A6NC57 917 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 TMEM191CA6NGB0 347 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 PAGE1O75459 146 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 F9P00740 461 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 CYBBP04839 570 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 ZNF143P52747 638 aaPredicted RBP20.14■□□□□ 0.81
HDAC4-212ENST00000495497 GRSF1Q12849 480 aaKnown RBP eCLIP20.14■□□□□ 0.81
HDAC4-212ENST00000495497 MPPE1Q53F39 396 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 MS4A13Q5J8X5 152 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 CHSY1Q86X52 802 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 LGI2Q8N0V4 545 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 PHTF2Q8N3S3 785 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 CENPIQ92674 756 aaPredicted RBP20.14■□□□□ 0.81
HDAC4-212ENST00000495497 PRICKLE1Q96MT3 831 aaPredicted RBP20.14■□□□□ 0.81
HDAC4-212ENST00000495497 XPO6Q96QU8 1125 aaKnown RBP20.14■□□□□ 0.81
HDAC4-212ENST00000495497 PNKPQ96T60 521 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 OSBPL6Q9BZF3 934 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 DLGAP2Q9P1A6 1054 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 HS3ST4Q9Y661 456 aa20.14■□□□□ 0.81
HDAC4-212ENST00000495497 GOLGA6L3A6NEY3 463 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 CACNG3O60359 315 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 TBL1XO60907 577 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 HDAC4P56524 1084 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 CCINQ13939 588 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 BRMS1LQ5PSV4 323 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 STRADAQ7RTN6 431 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 C14orf80Q86SX3 495 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 CFAP52Q8N1V2 620 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 CLDN23Q96B33 292 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 PANX2Q96RD6 677 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 PRMT1Q99873 361 aaKnown RBP20.13■□□□□ 0.81
HDAC4-212ENST00000495497 DDX50Q9BQ39 737 aaKnown RBP20.13■□□□□ 0.81
HDAC4-212ENST00000495497 MAGEB5Q9BZ81 275 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 SIK2Q9H0K1 926 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 ARHGEF4Q9NR80 690 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 STIM2Q9P246 746 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 DEC1Q9P2X7 70 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 SCINQ9Y6U3 715 aa20.13■□□□□ 0.81
HDAC4-212ENST00000495497 F5P12259 2224 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 CYP1A2P05177 515 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 CISD3P0C7P0 127 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 DRD1P21728 446 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 PSMA2P25787 234 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 HOXD9P28356 352 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-212ENST00000495497 SEC13P55735 322 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 RPS24P62847 133 aaKnown RBP20.12■□□□□ 0.81
HDAC4-212ENST00000495497 ZNF252P-AS1Q0IIN9 211 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 Q6ZS52 159 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-212ENST00000495497 BTBD6Q96KE9 485 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 CNPY3Q9BT09 278 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 NUP85Q9BW27 656 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 FBXO10Q9UK96 956 aa20.12■□□□□ 0.81
HDAC4-212ENST00000495497 SOWAHDA6NJG2 315 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 K7EQS6 105 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 NCAM2O15394 837 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 KAT7O95251 611 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 EIF2DP41214 584 aaKnown RBP20.11■□□□□ 0.81
HDAC4-212ENST00000495497 DGKGP49619 791 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 AUHQ13825 339 aaKnown RBP20.11■□□□□ 0.81
HDAC4-212ENST00000495497 LRRC32Q14392 662 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 GAS6Q14393 721 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 DGKKQ5KSL6 1271 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 GRAMD4Q6IC98 578 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 FBXL22Q6P050 247 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 SCYL2Q6P3W7 929 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 CIR1Q86X95 450 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-212ENST00000495497 CCDC185Q8N715 623 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 WFDC5Q8TCV5 224 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 IGSF8Q969P0 613 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms