RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 BBC3Q96PG8 261 aaPredicted RBP4.98□□□□□ -1.61
RBM39-240ENST00000495293 RPS6KC1Q96S38 1066 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 RIT2Q99578 217 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 GDF15Q99988 308 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 C16orf70Q9BSU1 422 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 FTOQ9C0B1 505 aaKnown RBP eCLIP4.98□□□□□ -1.61
RBM39-240ENST00000495293 TRPV6Q9H1D0 765 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 KCNH6Q9H252 994 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 ZNF302Q9NR11 478 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 NRBP2Q9NSY0 501 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 TRMT13Q9NUP7 481 aaKnown RBP4.98□□□□□ -1.61
RBM39-240ENST00000495293 HDAC6Q9UBN7 1215 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 DKK2Q9UBU2 259 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 DDX25Q9UHL0 483 aaKnown RBP4.98□□□□□ -1.61
RBM39-240ENST00000495293 PACSIN3Q9UKS6 424 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 NOL7Q9UMY1 257 aaKnown RBP4.98□□□□□ -1.61
RBM39-240ENST00000495293 SMC3Q9UQE7 1217 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 APOBEC2Q9Y235 224 aaKnown RBP4.98□□□□□ -1.61
RBM39-240ENST00000495293 CHST2Q9Y4C5 530 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 PCDHA10Q9Y5I2 948 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 NUMBLQ9Y6R0 609 aa4.98□□□□□ -1.61
RBM39-240ENST00000495293 GRIN2DO15399 1336 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 NRCAMQ92823 1304 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 ALPK3Q96L96 1907 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CYP3A7-CYP3A51PA0A087WV96 503 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 GSTTP1A0A1W2PQM5 241 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 A0A1W2PR48 441 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 RRN3P2A6NIE6 340 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 BTBD18B2RXH4 712 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 M0QZ92 97 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 HAS3O00219 553 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 TBX3O15119 743 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 MSH4O15457 936 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CHMP2AO43633 222 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 PRAMEF4O60810 478 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CAND2O75155 1236 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 PPFIA2O75334 1257 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 NUDT3O95989 172 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 FGBP02675 491 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 SMIM10L2AP0DMW4 78 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 SMIM10L2BP0DMW5 78 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CYP2C9P11712 490 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 FDPSP14324 419 aaKnown RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 CYP3A7P24462 503 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 MARK3P27448 753 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CYP2C18P33260 490 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 DDIT3P35638 169 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 THPOP40225 353 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 NEK2P51955 445 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 JAK3P52333 1124 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CCL23P55773 120 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CDK17Q00537 523 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 GUCY1B3Q02153 619 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 PPFIA1Q13136 1202 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 ITGB3BPQ13352 177 aaPredicted RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 LY6G5CQ5SRR4 150 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 RNF219Q5W0B1 726 aaPredicted RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 PSRC1Q6PGN9 363 aaPredicted RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 MIER3Q7Z3K6 550 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 AFAP1L1Q8TED9 768 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 TMX3Q96JJ7 454 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 FAM167AQ96KS9 214 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 FAM20AQ96MK3 541 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 QRSL1Q9H0R6 528 aaKnown RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 FOXP1Q9H334 677 aaPredicted RBP4.97□□□□□ -1.61
RBM39-240ENST00000495293 RNPEPQ9H4A4 650 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 SETD4Q9NVD3 440 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 ANKFY1Q9P2R3 1169 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 DPP7Q9UHL4 492 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 TBX21Q9UL17 535 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 CDY2AQ9Y6F7 541 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 EMSYQ7Z589 1322 aa4.97□□□□□ -1.61
RBM39-240ENST00000495293 PDE4DIPQ5VU43 2346 aa4.96□□□□□ -1.61
RBM39-240ENST00000495293 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.61
RBM39-240ENST00000495293 BRCA2P51587 3418 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 KAT6AQ92794 2004 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 IGLV3-22A0A075B6J6 115 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 RSPH10B2B2RC85 870 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 TRIM24O15164 1050 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 GPR39O43194 453 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 AKAP10O43572 662 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 HBP1O60381 514 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 NCR1O76036 304 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 TDP2O95551 362 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 TPM2P07951 284 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 IQCF3P0C7M6 154 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 RSPH10BP0C881 870 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 CSF2RAP15509 400 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 PDCP20941 246 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 XPAP23025 273 aaPredicted RBP4.96□□□□□ -1.62
RBM39-240ENST00000495293 TMOD1P28289 359 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 GJB2P29033 226 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 RAB27AP51159 221 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 SCAND1P57086 179 aa4.96□□□□□ -1.62
RBM39-240ENST00000495293 MRPL49Q13405 166 aaKnown RBP4.96□□□□□ -1.62
RBM39-240ENST00000495293 PTPAQ15257 358 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms