RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 CYP2U1Q7Z449 544 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 ANKS1BQ7Z6G8 1248 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 TMEM110Q86TL2 294 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 CFAP52Q8N1V2 620 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 NETO1Q8TDF5 533 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 GOLGA1Q92805 767 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 MRGPRX1Q96LB2 322 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 RTKNQ9BST9 563 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 LSM14BQ9BX40 385 aaKnown RBP11.04□□□□□ -0.64
NELFE-213ENST00000494956 MKRN2Q9H000 416 aaKnown RBP11.04□□□□□ -0.64
NELFE-213ENST00000494956 MTG2Q9H4K7 406 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 VPS45Q9NRW7 570 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 ELOVL2Q9NXB9 296 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 STOML2Q9UJZ1 356 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 NFE2L3Q9Y4A8 694 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 PCDHGA5Q9Y5G8 931 aa11.04□□□□□ -0.64
NELFE-213ENST00000494956 CAPN9O14815 690 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 PABPC1P11940 636 aaKnown RBP11.03□□□□□ -0.64
NELFE-213ENST00000494956 ITPKAP23677 461 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 ACADSBP45954 432 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 IRX4P78413 519 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 RPL6Q02878 288 aaKnown RBP11.03□□□□□ -0.64
NELFE-213ENST00000494956 DRAP1Q14919 205 aaPredicted RBP11.03□□□□□ -0.64
NELFE-213ENST00000494956 C2CD6Q53TS8 623 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
NELFE-213ENST00000494956 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 MMS22LQ6ZRQ5 1243 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 FAM183BPQ6ZVS7 135 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 LPCAT2Q7L5N7 544 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 ADIPOR2Q86V24 386 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 SLC41A1Q8IVJ1 513 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 FAM114A1Q8IWE2 563 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 DEFB106AQ8N104 65 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 SLC39A13Q96H72 371 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 PPP1R13BQ96KQ4 1090 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 SERPINB11Q96P15 392 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 VPS16Q9H269 839 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 NUMA1Q14980 2115 aa11.03□□□□□ -0.64
NELFE-213ENST00000494956 LNP1A1A4G5 178 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 EPHB6O15197 1021 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 IRAK2O43187 625 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 LATS1O95835 1130 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 TRUB2O95900 331 aaKnown RBP11.02□□□□□ -0.65
NELFE-213ENST00000494956 EPHX1P07099 455 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 TFE3P19532 575 aaPredicted RBP11.02□□□□□ -0.65
NELFE-213ENST00000494956 MAOBP27338 520 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 GGCXP38435 758 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 SLC11A2P49281 568 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 COPAP53621 1224 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 YWHAZP63104 245 aaKnown RBP11.02□□□□□ -0.65
NELFE-213ENST00000494956 PTK2Q05397 1052 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 RING1Q06587 406 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 ENPP2Q13822 863 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 PTPRNQ16849 979 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 PTPN20Q4JDL3 420 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 DCAF6Q58WW2 860 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 FSCBQ5H9T9 825 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 KLHDC7AQ5VTJ3 777 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 TAF3Q5VWG9 929 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 NUGGCQ68CJ6 796 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 OR6B2Q6IFH4 312 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 CIR1Q86X95 450 aaPredicted RBP11.02□□□□□ -0.65
NELFE-213ENST00000494956 UNC45BQ8IWX7 931 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 FAM71AQ8IYT1 594 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 LGI2Q8N0V4 545 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 CARNMT1Q8N4J0 409 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 STK32AQ8WU08 396 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 UCMAQ8WVF2 138 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 EDEM2Q9BV94 578 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 SLC2A11Q9BYW1 496 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 POPDC2Q9HBU9 364 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 FANCLQ9NW38 375 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 DACH1Q9UI36 760 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 GGA2Q9UJY4 613 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 INTS6Q9UL03 887 aaKnown RBP11.02□□□□□ -0.65
NELFE-213ENST00000494956 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.65
NELFE-213ENST00000494956 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 C4orf47A7E2U8 309 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 TM4SF5O14894 197 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 UCHL3P15374 230 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 KRT9P35527 623 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 IRAK1P51617 712 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 ARID5AQ03989 594 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 ZNF33AQ06730 810 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 LMAN2Q12907 356 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 KRT31Q15323 416 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 MEA1Q16626 185 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 FNDC3BQ53EP0 1204 aaKnown RBP11.01□□□□□ -0.65
NELFE-213ENST00000494956 TRIM61Q5EBN2 209 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 MS4A13Q5J8X5 152 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 PPM1JQ5JR12 505 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms