RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ADAMTS14Q8WXS8 1223 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CEP295NLQ96MC4 621 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 GABRG3Q99928 467 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 GPR174Q9BXC1 333 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 NACA2Q9H009 215 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 MIR1-1HGQ9H1L0 117 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 NMUR1Q9HB89 426 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM49BQ9NUQ9 324 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 ZNHIT6Q9NWK9 470 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 IL37Q9NZH6 218 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 EHD2Q9NZN4 543 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 APEX2Q9UBZ4 518 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 URB1O60287 2271 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM149AA5PLN7 773 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 KCNK3O14649 394 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 CYP26A1O43174 497 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 TLR5O60602 858 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 MFAP3LO75121 409 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 NDUFS2O75306 463 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 CLSTN1O94985 981 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 SYPP08247 313 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 P4HA1P13674 534 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 PON1P27169 355 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 ATICP31939 592 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 ZBED6P86452 979 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 FUT11Q495W5 492 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 SNX30Q5VWJ9 437 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 PDZD8Q8NEN9 1154 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 SLC2A14Q8TDB8 520 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 TOE1Q96GM8 510 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 MKRN2Q9H000 416 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM124BQ9H5Z6 455 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 PRDM16Q9HAZ2 1276 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 TOR4AQ9NXH8 423 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 PCOLCE2Q9UKZ9 415 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 CLEC4EQ9ULY5 219 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 CAPN11Q9UMQ6 739 aa12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 FNDC3AQ9Y2H6 1198 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-212ENST00000494610 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 CABIN1Q9Y6J0 2220 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 TMEM131Q92545 1883 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 CACNG3O60359 315 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 ZNF217O75362 1048 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 VNN1O95497 513 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 GYPCP04921 128 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 UCHL3P15374 230 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 MFAP3P55082 362 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 CLDN6P56747 220 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 GCNT1Q02742 428 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 NCOA4Q13772 614 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 SPOPLQ6IQ16 392 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 LAYNQ6UX15 382 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 HTR3DQ70Z44 454 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 FAM124AQ86V42 546 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 TTC39CQ8N584 583 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 SORCS1Q8WY21 1168 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 OVCA2Q8WZ82 227 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 TTYH3Q9C0H2 523 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 DNAI2Q9GZS0 605 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 WSB2Q9NYS7 404 aaPredicted RBP12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 BTBD3Q9Y2F9 522 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 STON1Q9Y6Q2 735 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 ATMQ13315 3056 aa12.3□□□□□ -0.44
CSNK1E-212ENST00000494610 A0A1W2PQH9 124 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 MEI4A8MW99 385 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 KLKB1P03952 638 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms