RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF7-213ENST00000494016 C2CD2Q9Y426 696 aa6.31□□□□□ -1.4
CPSF7-213ENST00000494016 PRKAB1Q9Y478 270 aa6.31□□□□□ -1.4
CPSF7-213ENST00000494016 SNX11Q9Y5W9 270 aa6.31□□□□□ -1.4
CPSF7-213ENST00000494016 SCINQ9Y6U3 715 aa6.31□□□□□ -1.4
CPSF7-213ENST00000494016 TRIP12Q14669 1992 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-213ENST00000494016 CITO14578 2027 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SMIM35A0A1B0GVV1 85 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 C3orf70A6NLC5 250 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PRR33A8MZF0 331 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 MED7O43513 233 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 NPTXRO95502 500 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RALAP11233 206 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 VDRP11473 427 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ITIH2P19823 946 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 POLR2BP30876 1174 aaKnown RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 GBP1P32455 592 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RFC1P35251 1148 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 GPD2P43304 727 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 KIR3DL1P43629 444 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PMS2P54278 862 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 HNRNPH2P55795 449 aaKnown RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 LACTBP83111 547 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 CDC42EP1Q00587 391 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 TAP1Q03518 808 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF844Q08AG5 666 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SNX1Q13596 522 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PIGHQ14442 188 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 TMEM132DQ14C87 1099 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 TAZQ16635 292 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PTPN20Q4JDL3 420 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 CEP85LQ5SZL2 805 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 UBAP2Q5T6F2 1119 aaKnown RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 AGBL2Q5U5Z8 902 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 LRRC38Q5VT99 294 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 KCTD16Q68DU8 428 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 DNAJC24Q6P3W2 148 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RHBDF2Q6PJF5 856 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 MFSD7Q6UXD7 560 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 NLRC3Q7RTR2 1065 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 XYLT1Q86Y38 959 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 CCDC105Q8IYK2 499 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PHACTR4Q8IZ21 702 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SH2D3CQ8N5H7 860 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 NIPA2Q8N8Q9 360 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 FBXO25Q8TCJ0 367 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ATG4AQ8WYN0 398 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RAPGEF5Q92565 580 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 MCRS1Q96EZ8 462 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 HPDLQ96IR7 371 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ATP6V1G3Q96LB4 118 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SLITRK1Q96PX8 696 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 EIF2AQ9BY44 585 aaKnown RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 GCOM2Q9BZD3 368 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 OSBPL8Q9BZF1 889 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 ARHGAP39Q9C0H5 1083 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PLEKHA5Q9HAU0 1116 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 SNTG2Q9NY99 539 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 WHRNQ9P202 907 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 HMGXB4Q9UGU5 601 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RASAL2Q9UJF2 1139 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 KIAA1257Q9ULG3 409 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
CPSF7-213ENST00000494016 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 INPP5FQ9Y2H2 1132 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 DERAQ9Y315 318 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 NME7Q9Y5B8 376 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 RPS6KL1Q9Y6S9 549 aa6.3□□□□□ -1.4
CPSF7-213ENST00000494016 NRCAMQ92823 1304 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 ERICH4A6NGS2 130 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PI4K2BG5E9Z4 385 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 TNFRSF10CO14798 259 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PPEF2O14830 753 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 UBOX5O94941 541 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CBX7O95931 251 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 WNT11O96014 354 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 F2P00734 622 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SHBGP04278 402 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 ERBB2P04626 1255 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PFKMP08237 780 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CYP2C9P11712 490 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 KRT10P13645 584 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 DARSP14868 501 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CD19P15391 556 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 NME1P15531 152 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 RAG1P15918 1043 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CAPN2P17655 700 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CYP2B6P20813 491 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 KLRC2P26717 231 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CTGFP29279 349 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms