RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	CYP3A43	Q9HB55	503 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SPHK2	Q9NRA0	654 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM30A	Q9NV96	361 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	IL37	Q9NZH6	218 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM63C	Q9P1W3	806 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	MMP17	Q9ULZ9	603 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	HPSE	Q9Y251	543 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	GVINP1	Q7Z2Y8	2422 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	FRYL	O94915	3013 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	DMD	P11532	3685 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TICRR	Q7Z2Z1	1910 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	WDR87	Q6ZQQ6	2873 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853		A0A1W2PQ27	194 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853		A0A1W2PQ64	194 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853		A0A1W2PQD8	194 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	CETN3	O15182	167 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	DEAF1	O75398	565 aa	Predicted RBP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	PDGFA	P04085	211 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TRIM49	P0CI25	452 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TRIM49C	P0CI26	452 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	EPB41	P11171	864 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	RALA	P11233	206 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	ATP11A	P98196	1134 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	C10orf120	Q5SQS8	335 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	STPG1	Q5TH74	334 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	EMC10	Q5UCC4	262 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TCERG1L	Q5VWI1	586 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	RNF43	Q68DV7	783 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	KRT39	Q6A163	491 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TADA2B	Q86TJ2	420 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	BBS7	Q8IWZ6	715 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	CACTIN-AS1	Q8N1I8	211 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TTC39C	Q8N584	583 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	IL17RC	Q8NAC3	791 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TAS1R2	Q8TE23	839 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	HMGB4	Q8WW32	186 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	CHAMP1	Q96JM3	812 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	CNOT6L	Q96LI5	555 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	HNRNPAB	Q99729	332 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TSG101	Q99816	390 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	NIF3L1	Q9GZT8	377 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	LACRT	Q9GZZ8	138 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	SMOC1	Q9H4F8	434 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM8A	Q9HCN3	771 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	CSNK1G1	Q9HCP0	422 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	RMND1	Q9NWS8	449 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	WDR35	Q9P2L0	1181 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	HOOK1	Q9UJC3	728 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	PCDHA5	Q9Y5H7	936 aa		7.94	□□□□□ -1.14
RBM39-238	ENST00000493853	GPR179	Q6PRD1	2367 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853		A0A1W2PQH9	124 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	FAM92A	A1XBS5	289 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	BCLAF3	A2AJT9	711 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TULP3	O75386	442 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	BEST1	O76090	585 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	SMC2	O95347	1197 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TBX18	O95935	607 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ZDHHC11B	P0C7U3	371 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	RARG	P13631	454 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	MZF1	P28698	734 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	GTF2H1	P32780	548 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ASPA	P45381	313 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	LIMK1	P53667	647 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ENPEP	Q07075	957 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	PPP3CA	Q08209	521 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	BECN1	Q14457	450 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	NFIL3	Q16649	462 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	GAB4	Q2WGN9	574 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ZNF394	Q53GI3	561 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	NKAPL	Q5M9Q1	402 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	C10orf76	Q5T2E6	689 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	DAB2IP	Q5VWQ8	1189 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	GRAMD4	Q6IC98	578 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TPGS1	Q6ZTW0	290 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	CLEC20A	Q6ZU45	233 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	HTR3D	Q70Z44	454 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	LPCAT2	Q7L5N7	544 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	C12orf40	Q86WS4	652 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM25	Q86YD3	366 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	FBXL13	Q8NEE6	735 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ZMIZ2	Q8NF64	920 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TP53INP1	Q96A56	240 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	EDEM2	Q9BV94	578 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	BBS2	Q9BXC9	721 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	DUSP16	Q9BY84	665 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	DNAJC17	Q9NVM6	304 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	HMGXB4	Q9UGU5	601 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	SCML2	Q9UQR0	700 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	ZDHHC9	Q9Y397	364 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	TSC2	P49815	1807 aa		7.93	□□□□□ -1.14
RBM39-238	ENST00000493853	PATJ	Q8NI35	1801 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	SPTBN4	Q9H254	2564 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	ZNF292	O60281	2723 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	FAM237A	A0A1B0GTK4	181 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TCRBV21S2A2	A0A5A6	115 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853		A6NHS1	94 aa		7.92	□□□□□ -1.14

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