RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 C6orf106Q9H6K1 298 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 NCKAP1Q9Y2A7 1128 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 A0A1B0GTQ1 180 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 VILLO15195 856 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 KLRC4O43908 158 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ZBED1O96006 694 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 DLDP09622 509 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 CD58P19256 250 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 HOXD9P28356 352 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 CASP1P29466 404 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 HLA-FP30511 346 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 GTF2H1P32780 548 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 C21orf59P57076 290 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 C1orf220Q5T0J3 134 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ADGRF1Q5T601 910 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 RESP18Q5W5W9 173 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ZNF776Q68DI1 518 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 CHST9Q7L1S5 443 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 KIAA0907Q7Z7F0 614 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 CACUL1Q86Y37 369 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ANKRD52Q8NB46 1076 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 TAS1R2Q8TE23 839 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 RNF139Q8WU17 664 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 CCDC47Q96A33 483 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 TMEM176AQ96HP8 235 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 HEXIM2Q96MH2 286 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 BBC3Q96PG8 261 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 TMEM8AQ9HCN3 771 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 COL5A1P20908 1838 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-207ENST00000493271 URB1O60287 2271 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 CAPN8A6NHC0 703 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 H0Y8X5 98 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 RRP8O43159 456 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 IRAK2O43187 625 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 STX10O60499 249 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 FSBPO95073 299 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 PABPC1P11940 636 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 ME1P48163 572 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 TKTL1P51854 596 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 RPS14P62263 151 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 KIAA0895LQ68EN5 471 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 KRT39Q6A163 491 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 SCML4Q8N228 414 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 OXR1Q8N573 874 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 KDM1BQ8NB78 822 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 SORCS1Q8WY21 1168 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 ELF4Q99607 663 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 ARID3AQ99856 593 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 APOBEC3GQ9HC16 384 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 PRSS16Q9NQE7 514 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 ABCC13Q9NSE7 274 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 GGA2Q9UJY4 613 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 CFAP45Q9UL16 551 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 CLEC4EQ9ULY5 219 aa11.47□□□□□ -0.57
SNRNP200-207ENST00000493271 A0A1W2PPC4 97 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 RFPL3O75679 317 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ASLP04424 464 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 JUPP14923 745 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 POLR2EP19388 210 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 NR2F2P24468 414 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 GCLMP48507 274 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ARRB1P49407 418 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ST8SIA6P61647 398 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ILKQ13418 452 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ARID5BQ14865 1188 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ZNF394Q53GI3 561 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 NUGGCQ68CJ6 796 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 MBLAC2Q68D91 279 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 DHRS13Q6UX07 377 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ADIPOR2Q86V24 386 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 FMNL3Q8IVF7 1028 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 UNC45BQ8IWX7 931 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 FAM186BQ8IYM0 893 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 CACTIN-AS1Q8N1I8 211 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 SLC4A11Q8NBS3 891 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 BAP1Q92560 729 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 PAGE5Q96GU1 130 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 IPO9Q96P70 1041 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 CISHQ9NSE2 258 aa11.46□□□□□ -0.57
SNRNP200-207ENST00000493271 ABCB8Q9NUT2 735 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms