RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRUB2O95900 331 aaKnown RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 TBX18O95935 607 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SP9P0CG40 484 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 TNNT1P13805 278 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 PFKLP17858 780 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 GBP1P32455 592 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 ATP5C1P36542 298 aaKnown RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 NBL1P41271 181 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 PTPN9P43378 593 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 HADHBP55084 474 aaKnown RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 DEUP1Q05D60 604 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 PDGFRLQ15198 375 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SLC25A52Q3SY17 297 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SCYL2Q6P3W7 929 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SND1Q7KZF4 910 aaKnown RBP eCLIP13.95□□□□□ -0.18
MSH6-208ENST00000493177 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 MIB1Q86YT6 1006 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SYCE1Q8N0S2 351 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 RNF34Q969K3 372 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SLC22A12Q96S37 553 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 DNMT3LQ9UJW3 386 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 HYOU1Q9Y4L1 999 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 CAPN6Q9Y6Q1 641 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 R4GN57 208 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 TRIOO75962 3097 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SLC12A8A0AV02 714 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 COCHO43405 550 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 HMBSP08397 361 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 TFE3P19532 575 aaPredicted RBP13.94□□□□□ -0.18
MSH6-208ENST00000493177 RDXP35241 583 aaKnown RBP13.94□□□□□ -0.18
MSH6-208ENST00000493177 TUBP50607 506 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 ZNF252P-AS1Q0IIN9 211 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 USP4Q13107 963 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 NR1H3Q13133 447 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 ZNF77Q15935 545 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 SH3PXD2AQ5TCZ1 1133 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 C11orf63Q6NUN7 778 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 TRIM58Q8NG06 486 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 OSCP1Q8WVF1 389 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 CLDN23Q96B33 292 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 NPY6RQ99463 290 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 HINFPQ9BQA5 517 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 IER2Q9BTL4 223 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
MSH6-208ENST00000493177 CHRDQ9H2X0 955 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 SMPD4Q9NXE4 827 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 FBXO4Q9UKT5 387 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 ARHGAP26Q9UNA1 814 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 CPQQ9Y646 472 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 WNT6Q9Y6F9 365 aa13.94□□□□□ -0.18
MSH6-208ENST00000493177 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 LEFTY2O00292 366 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 MSI1O43347 362 aaKnown RBP13.93□□□□□ -0.18
MSH6-208ENST00000493177 NFATC1O95644 943 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 FTCDO95954 541 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 F9P00740 461 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
MSH6-208ENST00000493177 ARSAP15289 507 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 COMTP21964 271 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 MAN1A1P33908 653 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 GJC1P36383 396 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 SLC1A1P43005 524 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 CCR3P51677 355 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 ATXN1P54253 815 aaKnown RBP13.93□□□□□ -0.18
MSH6-208ENST00000493177 GNG11P61952 73 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 GRSF1Q12849 480 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH6-208ENST00000493177 MTAPQ13126 283 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 ACAP1Q15027 740 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 MSANTD2Q6P1R3 559 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 TXNDC11Q6PKC3 985 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 PEX26Q7Z412 305 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH6-208ENST00000493177 CPNE8Q86YQ8 564 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 NIPA2Q8N8Q9 360 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 FAM83CQ9BQN1 747 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 HPS4Q9NQG7 708 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
MSH6-208ENST00000493177 PCSK1NQ9UHG2 260 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 AMFRQ9UKV5 643 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 SH3BP1Q9Y3L3 701 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 ALG6Q9Y672 507 aa13.93□□□□□ -0.18
MSH6-208ENST00000493177 IRAK2O43187 625 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 IRF1P10914 325 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 CHRNB1P11230 501 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 TBX4P57082 545 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 HADHQ16836 314 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms