RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TRIM16O95361 564 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 IGLV3-27P01718 113 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 DLDP09622 509 aaKnown RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 C7P10643 843 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 BMP6P22004 513 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 HLA-FP30511 346 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 GPD2P43304 727 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 RPL34P49207 117 aaKnown RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 RGS7P49802 495 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 MTA1Q13330 715 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 CAMK2GQ13555 558 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 OR2T3Q8NH03 318 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 P2RY11Q96G91 374 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 UBE2TQ9NPD8 197 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 GGA2Q9UJY4 613 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 TLR6Q9Y2C9 796 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 THADAQ6YHU6 1953 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 METTL12A8MUP2 240 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 MEI4A8MW99 385 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 BIN1O00499 593 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 PABPC1P11940 636 aaKnown RBP12.95□□□□□ -0.34
COL6A1-205ENST00000492851 KRT5P13647 590 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
COL6A1-205ENST00000492851 COPAP53621 1224 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 SNX16P57768 344 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 ST8SIA6P61647 398 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 FNDC3BQ53EP0 1204 aaKnown RBP12.95□□□□□ -0.34
COL6A1-205ENST00000492851 TMEM215Q68D42 235 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 IL27RAQ6UWB1 636 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 ADIPOR2Q86V24 386 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 MINDY1Q8N5J2 469 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 KDM1BQ8NB78 822 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-205ENST00000492851 DEFB124Q8NES8 71 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 MIS12Q9H081 205 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
COL6A1-205ENST00000492851 SLC6A17Q9H1V8 727 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 TMEM245Q9H330 911 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 ST7Q9NRC1 585 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 ABCB8Q9NUT2 735 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 SLC12A6Q9UHW9 1150 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
COL6A1-205ENST00000492851 GIPC1O14908 333 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
COL6A1-205ENST00000492851 TBL1XO60907 577 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 GABBR2O75899 941 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 MOCS3O95396 460 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 DNTTP04053 509 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 ASLP04424 464 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 PRKCHP24723 683 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 STX17P56962 302 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 UBE2HP62256 183 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
COL6A1-205ENST00000492851 FOXC1Q12948 553 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 MBLAC2Q68D91 279 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 TMEM110Q86TL2 294 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 ZNF606Q8WXB4 792 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 SORCS1Q8WY21 1168 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 KAT5Q92993 513 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 ZSWIM1Q9BR11 485 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 THAP9Q9H5L6 903 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 NCKAP1Q9Y2A7 1128 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
COL6A1-205ENST00000492851 TMEM8BA6NDV4 472 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 PIK3R2O00459 728 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 BCAT2O15382 392 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 RNASEH1O60930 286 aaKnown RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 APOEP02649 317 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 PROS1P07225 676 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 GLI1P08151 1106 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 SLC2A3P11169 496 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 GNA15P30679 374 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 TTC31Q49AM3 519 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 FAM133BQ5BKY9 247 aaKnown RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 GBP6Q6ZN66 633 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms