RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FAM221BA6H8Z2 402 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 MSI1O43347 362 aaKnown RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 IGLV3-25P01717 112 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 AFPP02771 609 aaKnown RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 CD59P13987 128 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 OXTRP30559 389 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC6A4P31645 630 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SGSHP51688 502 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 ZBTB16Q05516 673 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 GFPT1Q06210 699 aaPredicted RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC14A1Q13336 389 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 STARD3Q14849 445 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 CCDC40Q4G0X9 1142 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 NUGGCQ68CJ6 796 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 KLHL10Q6JEL2 608 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 DPY19L2P1Q6NXN4 242 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 DBX2Q6ZNG2 339 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 ARMCX6Q7L4S7 300 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 RRAGAQ7L523 313 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 ENOSF1Q7L5Y1 443 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 UNC45BQ8IWX7 931 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SCUBE3Q8IX30 993 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 DEFB119Q8N690 84 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 OR2T3Q8NH03 318 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 FIBINQ8TAL6 211 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 CLEC4CQ8WTT0 213 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 RNF139Q8WU17 664 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 ZNF606Q8WXB4 792 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SORCS1Q8WY21 1168 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 TTC17Q96AE7 1141 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 MYO19Q96H55 970 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 FCRL2Q96LA5 508 aaPredicted RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 HSPA12BQ96MM6 686 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 SRRTQ9BXP5 876 aaKnown RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 INTS2Q9H0H0 1204 aaKnown RBP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 FBRSQ9HAH7 460 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 KIAA1468Q9P260 1216 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 CYTH4Q9UIA0 394 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 RWDD2AQ9UIY3 292 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 CYP8B1Q9UNU6 501 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 TLR6Q9Y2C9 796 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 GTPBP10A4D1E9 387 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 BECN2A8MW95 431 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 M0QYV0 167 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 PAPSS1O43252 624 aaPredicted RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SART1O43290 800 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 ACSL4O60488 711 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SYNCRIPO60506 623 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 CALCAP01258 141 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 DLDP09622 509 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 PABPC1P11940 636 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 LCP1P13796 627 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 ACADSBP45954 432 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC11A2P49281 568 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 RGS7P49802 495 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 TBX4P57082 545 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 WDR45BQ5MNZ6 344 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SYCP2LQ5T4T6 812 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SYPL2Q5VXT5 272 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 RFWD3Q6PCD5 774 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 TRIM65Q6PJ69 517 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 CHST9Q7L1S5 443 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 AHI1Q8N157 1196 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 WDTC1Q8N5D0 677 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 KDM1BQ8NB78 822 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 WFDC5Q8TCV5 224 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 DQX1Q8TE96 717 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 MYEOVQ96EZ4 313 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SIPA1Q96FS4 1042 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 TOE1Q96GM8 510 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM81BQ96LP2 452 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 NUP58Q9BVL2 599 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 ZDHHC5Q9C0B5 715 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 PRSS16Q9NQE7 514 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 ABCB8Q9NUT2 735 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 SUSD2Q9UGT4 822 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 GGA2Q9UJY4 613 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 INTS6Q9UL03 887 aaKnown RBP8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 CTNND2Q9UQB3 1225 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 NAALADL1Q9UQQ1 740 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 AKAP13Q12802 2813 aa8.71□□□□□ -1.02
SMARCB1-207ENST00000491967 A0A1B0GTW7 788 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 GOLGA6L7A0A1B0GV03 622 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 BIN1O00499 593 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 NDUFS2O75306 463 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 FGFR1OPO95684 399 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ATP5BP06576 529 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 EPHX1P07099 455 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 SYPP08247 313 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF883P0CG24 379 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 CD70P32970 193 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 STX17P56962 302 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 UBE2HP62256 183 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms