RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 APEX2Q9UBZ4 518 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 STON1Q9Y6Q2 735 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TPRP12270 2363 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 LNP1A1A4G5 178 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 HLA-FP30511 346 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC6A4P31645 630 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 IL12RB1P42701 662 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 KCNMA1Q12791 1236 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 RAPGEF1Q13905 1077 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 MEA1Q16626 185 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 AASDHQ4L235 1098 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 STPG1Q5TH74 334 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 NADSYN1Q6IA69 706 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 TMEM110Q86TL2 294 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 C12orf50Q8NA57 414 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 DQX1Q8TE96 717 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 DDI1Q8WTU0 396 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 STK32AQ8WU08 396 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 SHC3Q92529 594 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 FCRL2Q96LA5 508 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 MRGPRX1Q96LB2 322 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC2A11Q9BYW1 496 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 MUC22E2RYF6 1773 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-206ENST00000491668 FRYQ5TBA9 3013 aa13.21□□□□□ -0.3
SEC61A1-206ENST00000491668 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 A0A1W2PQC6 194 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 E5RJQ4 531 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 FBXO21O94952 628 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 LATS1O95835 1130 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 USP8P40818 1118 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 KLK7P49862 253 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 PITX1P78337 314 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 TAF5Q15542 800 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 FUT11Q495W5 492 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 RFWD3Q6PCD5 774 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 DEFB119Q8N690 84 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 PRICKLE1Q96MT3 831 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 SPAG5Q96R06 1193 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 PLCB1Q9NQ66 1216 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 ELOVL2Q9NXB9 296 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 SIK3Q9Y2K2 1263 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
SEC61A1-206ENST00000491668 CEP192Q8TEP8 1941 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 THAP12O43422 761 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 CYBBP04839 570 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 NCAM1P13591 858 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 UCHL3P15374 230 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 ITPKAP23677 461 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 PRKCHP24723 683 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 GNA15P30679 374 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 TBX4P57082 545 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 IRX4P78413 519 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 RING1Q06587 406 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 PDCLQ13371 301 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 EIF4EBP2Q13542 120 aaPredicted RBP13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF234Q14588 700 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 MPPE1Q53F39 396 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 PIK3R6Q5UE93 754 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 SDE2Q6IQ49 451 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 PIGKQ92643 395 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 XPO7Q9UIA9 1087 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 CYP8B1Q9UNU6 501 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
SEC61A1-206ENST00000491668 PI4KAP42356 2102 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms