RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CISD3P0C7P0 127 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 KRT3P12035 628 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 GZMAP12544 262 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TNFRSF4P43489 277 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 BRMS1LQ5PSV4 323 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 C10orf76Q5T2E6 689 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 VPS36Q86VN1 386 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CHSY1Q86X52 802 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MAML2Q8IZL2 1156 aaPredicted RBP16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RPLP0P6Q8NHW5 317 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 JOSD2Q8TAC2 188 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RXFP2Q8WXD0 754 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 VCPIP1Q96JH7 1222 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PRICKLE1Q96MT3 831 aaPredicted RBP16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SLC2A11Q9BYW1 496 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 IRF2BPLQ9H1B7 796 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TCRBV5S1A1TA0A578 114 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 C2CD4BA6NLJ0 364 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SIGLEC16A6NMB1 481 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TBL1XO60907 577 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RTN2O75298 545 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PDGFRAP16234 1089 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TACR2P21452 398 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RRM1P23921 792 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SDC4P31431 198 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RDXP35241 583 aaKnown RBP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CXCL12P48061 93 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CXCR3P49682 368 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SATB1Q01826 763 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CSTF1Q05048 431 aaKnown RBP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MS4A13Q5J8X5 152 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MPP7Q5T2T1 576 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RAP1GAP2Q684P5 730 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 BNIPLQ7Z465 357 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HJURPQ8NCD3 748 aaPredicted RBP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 OR8K1Q8NGG5 319 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 USP33Q8TEY7 942 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ACDQ96AP0 544 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DNAJC7Q99615 494 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 WDCPQ9H6R7 721 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ARHGEF38Q9NXL2 777 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SLC27A6Q9Y2P4 619 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PAXBP1Q9Y5B6 917 aa16.87■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ANKRD62A6NC57 917 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 F5H5T6 163 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MFAP3LO75121 409 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 FTLP02792 175 aaPredicted RBP16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 GPD1P21695 349 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PTPN9P43378 593 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ATP11AP98196 1134 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ARID5BQ14865 1188 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CCDC14Q49A88 953 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DNAAF5Q86Y56 855 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DRC7Q8IY82 874 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 LGI2Q8N0V4 545 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MYEOVQ96EZ4 313 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TRIM11Q96F44 468 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MCEEQ96PE7 176 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TKTL2Q9H0I9 626 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ABHD10Q9NUJ1 306 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 C2orf42Q9NWW7 574 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ARHGAP20Q9P2F6 1191 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CLEC4EQ9ULY5 219 aa16.86■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ANTXRLA6NF34 631 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ATMINO43313 823 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PAGE1O75459 146 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ENDOD1O94919 500 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ADCY5O95622 1261 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SP9P0CG40 484 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CHRM1P11229 460 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RFC1P35251 1148 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TIE1P35590 1138 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RPS24P62847 133 aaKnown RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CDO1Q16878 200 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 C15orf59Q2T9L4 293 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ZNF528Q3MIS6 628 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HSF5Q4G112 596 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PPP1R15BQ5SWA1 713 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RNF43Q68DV7 783 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 WDR59Q6PJI9 974 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TSSK4Q6SA08 328 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 STRADAQ7RTN6 431 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ANKS1BQ7Z6G8 1248 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ZNF557Q8N988 423 aaPredicted RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 KCNV2Q8TDN2 545 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ATOH1Q92858 354 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms