RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 IRGQQ8WZA9 623 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
SMPD4-220ENST00000491319 FOXJ1Q92949 421 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 SLC32A1Q9H598 525 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 ABCB8Q9NUT2 735 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 SPAARA0A1B0GVQ0 90 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 P4HA2O15460 535 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 SYPP08247 313 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 SLC6A4P31645 630 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 GCNT1Q02742 428 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 CETN1Q12798 172 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 STILQ15468 1287 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 FNDC3BQ53EP0 1204 aaKnown RBP16.36■□□□□ 0.21
SMPD4-220ENST00000491319 FAM133BQ5BKY9 247 aaKnown RBP16.36■□□□□ 0.21
SMPD4-220ENST00000491319 WDR45BQ5MNZ6 344 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 UNQ6494/PRO21346Q6UXR6 183 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 ADIPOR2Q86V24 386 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 TRIM59Q8IWR1 403 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 ZCCHC9Q8N567 271 aaKnown RBP16.36■□□□□ 0.21
SMPD4-220ENST00000491319 WFIKKN2Q8TEU8 576 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 TMA16Q96EY4 203 aaKnown RBP16.36■□□□□ 0.21
SMPD4-220ENST00000491319 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 MIS12Q9H081 205 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 SUSD2Q9UGT4 822 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 GGA2Q9UJY4 613 aa16.36■□□□□ 0.21
SMPD4-220ENST00000491319 PTPRBP23467 1997 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 UPK3BL1B0FP48 263 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 UPK3BL2E5RIL1 263 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 TIMM44O43615 452 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 GADD45BO75293 160 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 IGLV3-19P01714 112 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 ACADMP11310 421 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 PABPC1P11940 636 aaKnown RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 GNSP15586 552 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 FAM193AP78312 1265 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 SIM1P81133 766 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 KCNH2Q12809 1159 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 GRIK2Q13002 908 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 PAK1Q13153 545 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 CAMK2GQ13555 558 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 E2F5Q15329 346 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 PTPRNQ16849 979 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 FOXR2Q6PJQ5 311 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 KIAA0907Q7Z7F0 614 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 FAM124AQ86V42 546 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 AHI1Q8N157 1196 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 HSFY1Q96LI6 401 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 SCNM1Q9BWG6 230 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 ADAM33Q9BZ11 813 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 TMEM245Q9H330 911 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 DNAAF2Q9NVR5 837 aaKnown RBP16.35■□□□□ 0.21
SMPD4-220ENST00000491319 CABIN1Q9Y6J0 2220 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 CFAP47Q6ZTR5 3102 aa16.35■□□□□ 0.21
SMPD4-220ENST00000491319 AKAP13Q12802 2813 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 TBL1XO60907 577 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 GJB3O75712 270 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 FBXO21O94952 628 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 FYNP06241 537 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 PROS1P07225 676 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 CD59P13987 128 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 OXTRP30559 389 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 CD70P32970 193 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 MARSP56192 900 aaKnown RBP16.34■□□□□ 0.21
SMPD4-220ENST00000491319 TBX4P57082 545 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 PIK3R6Q5UE93 754 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 MBLAC2Q68D91 279 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 NADSYN1Q6IA69 706 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 UNC45BQ8IWX7 931 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 CADM4Q8NFZ8 388 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 DNASE2BQ8WZ79 361 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 GOLGA1Q92805 767 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 PRICKLE1Q96MT3 831 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-220ENST00000491319 TMEM121BQ9BXQ6 578 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-220ENST00000491319 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
SMPD4-220ENST00000491319 MIR1-1HGQ9H1L0 117 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 SPEGQ15772 3267 aa16.34■□□□□ 0.21
SMPD4-220ENST00000491319 A0A1B0GTW7 788 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 HYAL3O43820 417 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 ACSL4O60488 711 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 AFPP02771 609 aaKnown RBP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 KRT5P13647 590 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 SLC11A2P49281 568 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 RING1Q06587 406 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 ADAM32Q8TC27 787 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 DQX1Q8TE96 717 aaKnown RBP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 FAM149B1Q96BN6 582 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 MYEOVQ96EZ4 313 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 FCRL2Q96LA5 508 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 CAMK1GQ96NX5 476 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 NUP58Q9BVL2 599 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 SRRTQ9BXP5 876 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms