RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 PDZD7Q9H5P4 517 aa12.66□□□□□ -0.38
FXR1-220ENST00000491062 NGRNQ9NPE2 291 aaKnown RBP12.66□□□□□ -0.38
FXR1-220ENST00000491062 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
FXR1-220ENST00000491062 GTF2IRD1Q9UHL9 959 aa12.66□□□□□ -0.38
FXR1-220ENST00000491062 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
FXR1-220ENST00000491062 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
FXR1-220ENST00000491062 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.66□□□□□ -0.38
FXR1-220ENST00000491062 PRR5-ARHGAP8B1AHC4 643 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 NFKBIEO00221 500 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
FXR1-220ENST00000491062 SOCS7O14512 581 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 GLRA3O75311 464 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 FKBP6O75344 327 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 GSRP00390 522 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 MLNP12872 115 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 CYP2F1P24903 491 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 CPOXP36551 454 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 PTPN9P43378 593 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 NR2C2P49116 596 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 CLCN3P51790 818 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 AP2B1P63010 937 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 ARHGAP8P85298 464 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 SLC6A3Q01959 620 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 PLA2G2CQ5R387 149 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 MBLAC2Q68D91 279 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
FXR1-220ENST00000491062 AAGABQ6PD74 315 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 ADGRF2Q8IZF7 708 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 TSC22D3Q99576 134 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 C20orf27Q9GZN8 174 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 ZNF395Q9H8N7 513 aaPredicted RBP12.65□□□□□ -0.38
FXR1-220ENST00000491062 IFT122Q9HBG6 1241 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 PDP2Q9P2J9 529 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
FXR1-220ENST00000491062 GRAP2O75791 330 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 C22orf31O95567 290 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 CRABP2P29373 138 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 HDAC4P56524 1084 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 RBP5P82980 135 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 TEDDM1Q5T9Z0 273 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 MROH9Q5TGP6 573 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 EFCAB12Q6NXP0 572 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 SCYL2Q6P3W7 929 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
FXR1-220ENST00000491062 FGD4Q96M96 766 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ZNF778Q96MU6 729 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 C11orf84Q9BUA3 381 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 SMARCAD1Q9H4L7 1026 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 NDE1Q9NXR1 346 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 EMCNQ9ULC0 261 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 OTOFQ9HC10 1997 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ENO4A6NNW6 628 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 CLGNO14967 610 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 FGF3P11487 239 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 ALOX15P16050 662 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 SCNN1AP37088 669 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 FDFT1P37268 417 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ALDH18A1P54886 795 aaKnown RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 DSG1Q02413 1049 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 KDSRQ06136 332 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 TREML2Q5T2D2 321 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 WDR75Q8IWA0 830 aaKnown RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 LINC01465Q8N7H1 131 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ZFAND2BQ8WV99 257 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ZNF668Q96K58 619 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 SH3GL3Q99963 347 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 FAM192AQ9GZU8 254 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 DNAJC28Q9NX36 388 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
FXR1-220ENST00000491062 MARCOQ9UEW3 520 aaPredicted RBP12.64□□□□□ -0.39
FXR1-220ENST00000491062 CITO14578 2027 aa12.63□□□□□ -0.39
FXR1-220ENST00000491062 A0A088AWK7 358 aa12.63□□□□□ -0.39
FXR1-220ENST00000491062 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
FXR1-220ENST00000491062 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
FXR1-220ENST00000491062 PIK3R2O00459 728 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms