RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 DNAJC14Q6Y2X3 702 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 DPH6Q7L8W6 267 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 ACOT1Q86TX2 421 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 UNC93AQ86WB7 457 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 ADGRF2Q8IZF7 708 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 MCOLN2Q8IZK6 566 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CMTM8Q8IZV2 173 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 TMEM86AQ8N2M4 240 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CELF5Q8N6W0 485 aaKnown RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 OR6B3Q8NGW1 331 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 KIF18AQ8NI77 898 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 BPIFB1Q8TDL5 484 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CPA5Q8WXQ8 436 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 HEXIM2Q96MH2 286 aaKnown RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 NOX5Q96PH1 765 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 GCNAQ96QF7 691 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 PKMYT1Q99640 499 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 THAP2Q9H0W7 228 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 SNX25Q9H3E2 840 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 NEUROD4Q9HD90 331 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 GKN1Q9NS71 199 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 THG1LQ9NWX6 298 aaKnown RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CCL26Q9Y258 94 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 PCDHGA2Q9Y5H1 932 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CAPN6Q9Y6Q1 641 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 FAM186AA6NE01 2351 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 GRID2IPA4D2P6 1211 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 A8MXQ7 604 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 MED7O43513 233 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 BUB1O43683 1085 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 LILRB5O75023 590 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CYP1A2P05177 515 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 PDGFRBP09619 1106 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 TDGF1P13385 188 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CASQ1P31415 396 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 AVPR1AP37288 418 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CCR3P51677 355 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 RPL10AP62906 217 aaKnown RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 SATB1Q01826 763 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 PTP4A2Q12974 167 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 PON2Q15165 354 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 TCEAL1Q15170 157 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CNGA2Q16280 664 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 SGO2Q562F6 1265 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 TRIM68Q6AZZ1 485 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 ALKBH2Q6NS38 261 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 FAM171BQ6P995 826 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 LCLAT1Q6UWP7 414 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 LRRC69Q6ZNQ3 347 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 MON1BQ7L1V2 547 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 MON1AQ86VX9 555 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 RALGPS2Q86X27 583 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 PHF13Q86YI8 300 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 TREML1Q86YW5 311 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 SPATA2LQ8IUW3 424 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 SCN4BQ8IWT1 228 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CRYBG2Q8N1P7 616 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 WDTC1Q8N5D0 677 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 C12orf29Q8N999 325 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 C1orf131Q8NDD1 294 aaKnown RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 SLC35G2Q8TBE7 412 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CTNNBL1Q8WYA6 563 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 RFFLQ8WZ73 363 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 MRPS31Q92665 395 aaKnown RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 USP13Q92995 863 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF653Q96CK0 615 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 RMDN1Q96DB5 314 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 MSANTD3Q96H12 275 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CYP2S1Q96SQ9 504 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 FAM83CQ9BQN1 747 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 FAM126AQ9BYI3 521 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 LHX5Q9H2C1 402 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 DPEP3Q9H4B8 488 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 RUBCNLQ9H714 662 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 PRMT8Q9NR22 394 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 TDP1Q9NUW8 608 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 NCDNQ9UBB6 729 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 KIAA1257Q9ULG3 409 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 EP300Q09472 2414 aaPredicted RBP7.92□□□□□ -1.14
CLDN1-202ENST00000490800 FRYLO94915 3013 aa7.92□□□□□ -1.14
CLDN1-202ENST00000490800 CTAGE9A4FU28 777 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 ANKRD33BA6NCL7 494 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 OTOL1A6NHN0 477 aaPredicted RBP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 PALMO75781 387 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 MTA2O94776 668 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 MYBL1P10243 752 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 MMP8P22894 467 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 DDX6P26196 483 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 PCSK1P29120 753 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 HOXC13P31276 330 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 NSFP46459 744 aaKnown RBP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 NRLP54845 237 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 NAP1L1P55209 391 aaKnown RBP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 PSMC1P62191 440 aaKnown RBP7.91□□□□□ -1.14
CLDN1-202ENST00000490800 RUNX3Q13761 415 aa7.91□□□□□ -1.14
CLDN1-202ENST00000490800 LRRC32Q14392 662 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms