RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 A0A1B0GTW7 788 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 SPAARA0A1B0GVQ0 90 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 LTFP02788 710 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 ATP5BP06576 529 aaKnown RBP20.53■□□□□ 0.88
SREBF1-216ENST00000490796 HLA-EP13747 358 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 CD44P16070 742 aaKnown RBP20.53■□□□□ 0.88
SREBF1-216ENST00000490796 HLA-FP30511 346 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 TBX4P57082 545 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 TMEM215Q68D42 235 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 MSANTD2Q6P1R3 559 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 CCDC117Q8IWD4 279 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-216ENST00000490796 OR2I1PQ8NGU4 316 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 OR2T3Q8NH03 318 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 CYB5D2Q8WUJ1 264 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 KAT5Q92993 513 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 SCNM1Q9BWG6 230 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 ADAM33Q9BZ11 813 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 ZDHHC5Q9C0B5 715 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 ST7Q9NRC1 585 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 PCDHB9Q9Y5E1 797 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 ADAMTS9Q9P2N4 1935 aa20.53■□□□□ 0.88
SREBF1-216ENST00000490796 BIN1O00499 593 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 TBL1XO60907 577 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 PABPC1P11940 636 aaKnown RBP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 KRT5P13647 590 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 POLR2EP19388 210 aaKnown RBP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 GCNT1Q02742 428 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 SLC14A1Q13336 389 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 DCAF12L1Q5VU92 463 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 TTI2Q6NXR4 508 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 FAM124AQ86V42 546 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 ZCCHC9Q8N567 271 aaKnown RBP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 EHBP1Q8NDI1 1231 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 IRX2Q9BZI1 471 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 LHX5Q9H2C1 402 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 DNAAF2Q9NVR5 837 aaKnown RBP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 NFE2L3Q9Y4A8 694 aa20.52■□□□□ 0.88
SREBF1-216ENST00000490796 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.52■□□□□ 0.88
SREBF1-216ENST00000490796 C1QTNF9BB2RNN3 333 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 KCNJ18B7U540 433 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 H0Y626 953 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 RNF225M0QZC1 329 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-216ENST00000490796 IRAK2O43187 625 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 SART1O43290 800 aaKnown RBP20.51■□□□□ 0.87
SREBF1-216ENST00000490796 ACSL4O60488 711 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 TRIM16O95361 564 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 FGFR1OPO95684 399 aaKnown RBP20.51■□□□□ 0.87
SREBF1-216ENST00000490796 AFPP02771 609 aaKnown RBP20.51■□□□□ 0.87
SREBF1-216ENST00000490796 C1QTNF9P0C862 333 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 COPAP53621 1224 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 STX17P56962 302 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 KCNH2Q12809 1159 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 MBLAC2Q68D91 279 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 RFWD3Q6PCD5 774 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 DNASE2BQ8WZ79 361 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 SNX19Q92543 992 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 FAM149B1Q96BN6 582 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 SERPINB11Q96P15 392 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 FBRSQ9HAH7 460 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 STIM2Q9P246 746 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 IGF2RP11717 2491 aa20.51■□□□□ 0.87
SREBF1-216ENST00000490796 METTL12A8MUP2 240 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 PPP1R3GB7ZBB8 358 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 CAPN9O14815 690 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 TOP3BO95985 862 aaKnown RBP20.5■□□□□ 0.87
SREBF1-216ENST00000490796 DLDP09622 509 aaKnown RBP20.5■□□□□ 0.87
SREBF1-216ENST00000490796 ST8SIA6P61647 398 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 RING1Q06587 406 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 GRIK2Q13002 908 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 PAK1Q13153 545 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 CAMK2GQ13555 558 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-216ENST00000490796 MPP7Q5T2T1 576 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 PIK3R6Q5UE93 754 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 FOXR2Q6PJQ5 311 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 ARHGEF19Q8IW93 802 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 MFN1Q8IWA4 741 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.5■□□□□ 0.872e-6■■■■■ 44.8
SREBF1-216ENST00000490796 HJURPQ8NCD3 748 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-216ENST00000490796 TRIM62Q9BVG3 475 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 SUN2Q9UH99 717 aa20.5■□□□□ 0.87
SREBF1-216ENST00000490796 GOLGA6L7A0A1B0GV03 622 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 BCAT2O15382 392 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-216ENST00000490796 MED7O43513 233 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 HYAL3O43820 417 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-216ENST00000490796 CALCAP01258 141 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 IGLV3-19P01714 112 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 DNTTP04053 509 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 CD59P13987 128 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 ACADSBP45954 432 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 MORC3Q14149 939 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 ADIPOR2Q86V24 386 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 CREBRFQ8IUR6 639 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 ZNF366Q8N895 744 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 LMO3Q8TAP4 145 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 CLEC4CQ8WTT0 213 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 AZIN2Q96A70 460 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 ZSWIM1Q9BR11 485 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 SRRTQ9BXP5 876 aaKnown RBP20.49■□□□□ 0.87
SREBF1-216ENST00000490796 INTS2Q9H0H0 1204 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms