RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	GPR78	Q96P69	363 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	GATA5	Q9BWX5	397 aa	Predicted RBP	4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	PRDM16	Q9HAZ2	1276 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	MOV10	Q9HCE1	1003 aa	Known RBP	4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	ARFGAP3	Q9NP61	516 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	TMEM45A	Q9NWC5	275 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	HEY2	Q9UBP5	337 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	B3GNT3	Q9Y2A9	372 aa		4.8	□□□□□ -1.64
PHC3-212	ENST00000490723	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	AQP12B	A6NM10	295 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723		M0QYT0	321 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	NPPB	P16860	134 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	SOX2	P48431	317 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	CCT4	P50991	539 aa	Known RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	DMWD	Q09019	674 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	ZNF260	Q3ZCT1	412 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	RINT1	Q6NUQ1	792 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723		Q8N9P0	234 aa	Predicted RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	SVIP	Q8NHG7	77 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	WIPF2	Q8TF74	440 aa	Predicted RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	P2RY11	Q96G91	374 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	FAR2	Q96K12	515 aa		4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	IPO11	Q9UI26	975 aa	Known RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.79	□□□□□ -1.64
PHC3-212	ENST00000490723	EMSY	Q7Z589	1322 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	DNPH1	O43598	174 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	ASNA1	O43681	348 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	UGDH	O60701	494 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	CNOT3	O75175	753 aa	Known RBP	4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	RPP40	O75818	363 aa	Known RBP	4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	KAT7	O95251	611 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	AKR1A1	P14550	325 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	TFEB	P19484	476 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	SERPINB3	P29508	390 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	ME1	P48163	572 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	MTX1	Q13505	466 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	LAMB3	Q13751	1172 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	GLE1	Q53GS7	698 aa	Known RBP	4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	AWAT2	Q6E213	333 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	WDR93	Q6P2C0	686 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	PIP4P1	Q86T03	277 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	BCAS4	Q8TDM0	211 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	WDR60	Q8WVS4	1066 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	TMEM41A	Q96HV5	264 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	PAAF1	Q9BRP4	392 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	ABHD14A	Q9BUJ0	271 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	SLC52A1	Q9NWF4	448 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	HS3ST3B1	Q9Y662	390 aa		4.78	□□□□□ -1.64
PHC3-212	ENST00000490723	SPATA31A5	Q5VU36	1347 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	SPATA31A7	Q8IWB4	1347 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	LY6G6E	A0A0G2JKS1	128 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	GXYLT2	A0PJZ3	443 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	RFPL3S	P0C7P2	107 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	SLC37A1	P57057	533 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	AAK1	Q2M2I8	961 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	LIPM	Q5VYY2	423 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	MORC1	Q86VD1	984 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	GATAD2A	Q86YP4	633 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	NRSN1	Q8IZ57	195 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	SRFBP1	Q8NEF9	429 aa	Known RBP	4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	STYX	Q8WUJ0	223 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	REXO5	Q96IC2	774 aa	Known RBP	4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	ZFYVE19	Q96K21	471 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	TRMO	Q9BU70	441 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	CCDC134	Q9H6E4	229 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	KCNK9	Q9NPC2	374 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	POT1	Q9NUX5	634 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	RAB21	Q9UL25	225 aa		4.77	□□□□□ -1.65
PHC3-212	ENST00000490723	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	LOC105369274	A0A096LPK9	316 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	LOC102723532	A0A0G2JNH3	316 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	KIF28P	B7ZC32	967 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723		F8W810	466 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	NKX2-8	O15522	239 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	FFAR2	O15552	330 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	TNFRSF6B	O95407	300 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	HMGB1	P09429	215 aa	Known RBP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	IL6ST	P40189	918 aa	Predicted RBP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	RNASEL	Q05823	741 aa	Known RBP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	TECPR1	Q7Z6L1	1165 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	TRABD2A	Q86V40	505 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	OR4N4	Q8N0Y3	316 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	ARFGAP1	Q8N6T3	406 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF527	Q8NB42	609 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	TUBB6	Q9BUF5	446 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	OBP2B	Q9NPH6	170 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	TRPC5	Q9UL62	973 aa	Predicted RBP	4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	SLC12A4	Q9UP95	1085 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	LRCH1	Q9Y2L9	728 aa		4.76	□□□□□ -1.65
PHC3-212	ENST00000490723	MYMK	A6NI61	221 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723		H3BNX3	289 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	PPP6R2	O75170	966 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	CNTN5	O94779	1100 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	SETSIP	P0DME0	302 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	PSG1	P11464	419 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	POLG	P54098	1239 aa	Predicted RBP	4.75	□□□□□ -1.65

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