RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RPS24	P62847	133 aa	Known RBP	19.27	■□□□□ 0.68
C4A-256	ENST00000490663	ZBED6	P86452	979 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	ATP11A	P98196	1134 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	NHLH1	Q02575	133 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	EIF4EBP2	Q13542	120 aa	Predicted RBP	19.27	■□□□□ 0.68
C4A-256	ENST00000490663	SH3PXD2A	Q5TCZ1	1133 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	HEATR6	Q6AI08	1181 aa	Known RBP	19.27	■□□□□ 0.68
C4A-256	ENST00000490663	ACAD10	Q6JQN1	1059 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	CIR1	Q86X95	450 aa	Predicted RBP	19.27	■□□□□ 0.68
C4A-256	ENST00000490663	VSTM4	Q8IW00	320 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	LGI2	Q8N0V4	545 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	SPEM1	Q8N4L4	309 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	ALLC	Q8N6M5	410 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	PRMT8	Q9NR22	394 aa	Predicted RBP	19.27	■□□□□ 0.68
C4A-256	ENST00000490663	STOML2	Q9UJZ1	356 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	HCN2	Q9UL51	889 aa		19.27	■□□□□ 0.68
C4A-256	ENST00000490663	ANKRD36	A6QL64	1941 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	19.26	■□□□□ 0.67
C4A-256	ENST00000490663		I6L893	689 aa	Predicted RBP	19.26	■□□□□ 0.67
C4A-256	ENST00000490663	ADCY5	O95622	1261 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	LATS1	O95835	1130 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	CALB1	P05937	261 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	TPM3	P06753	285 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	RRM1	P23921	792 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	GBP1	P32455	592 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	SCNN1A	P37088	669 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	GRIA2	P42262	883 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	IRAK1	P51617	712 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	DEUP1	Q05D60	604 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	GEN1	Q17RS7	908 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	MPPE1	Q53F39	396 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	PIK3R6	Q5UE93	754 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	MCOLN2	Q8IZK6	566 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	USP33	Q8TEY7	942 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	RXFP2	Q8WXD0	754 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	EXOC4	Q96A65	974 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	TMA16	Q96EY4	203 aa	Known RBP	19.26	■□□□□ 0.67
C4A-256	ENST00000490663	HHIP	Q96QV1	700 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	PRRX2	Q99811	253 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	SELENOO	Q9BVL4	669 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	STAP1	Q9ULZ2	295 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	LUC7L2	Q9Y383	392 aa	Known RBP	19.26	■□□□□ 0.67
C4A-256	ENST00000490663	WDR87	Q6ZQQ6	2873 aa		19.26	■□□□□ 0.67
C4A-256	ENST00000490663	KLF8	O95600	359 aa	Predicted RBP	19.25	■□□□□ 0.67
C4A-256	ENST00000490663	TACR2	P21452	398 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	CXCL12	P48061	93 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	CCR3	P51677	355 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	NUBP1	P53384	320 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	EGFLAM	Q63HQ2	1017 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	SPECC1L	Q69YQ0	1117 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	DNAJC24	Q6P3W2	148 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	TMC6	Q7Z403	805 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	ATP6V0D2	Q8N8Y2	350 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	ACOX2	Q99424	681 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	TRIM5	Q9C035	493 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	KCNH6	Q9H252	994 aa		19.25	■□□□□ 0.67
C4A-256	ENST00000490663	NUMA1	Q14980	2115 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	TCRBV5S1A1T	A0A578	114 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	KCNU1	A8MYU2	1149 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663		K7ESF4	209 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	PAGE1	O75459	146 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	TDGF1	P13385	188 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	HNRNPL	P14866	589 aa	Known RBP eCLIP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	CCR1	P32246	355 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	RFC1	P35251	1148 aa	Predicted RBP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	KIR2DL1	P43626	348 aa	Predicted RBP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	RPL7A	P62424	266 aa	Known RBP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	C1QBP	Q07021	282 aa	Known RBP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	SLC25A52	Q3SY17	297 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	FBXO43	Q4G163	708 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	MS4A13	Q5J8X5	152 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	C14orf80	Q86SX3	495 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	FAM131B	Q86XD5	332 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	SYNPO	Q8N3V7	929 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	CARNMT1	Q8N4J0	409 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	TXNDC5	Q8NBS9	432 aa	Known RBP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	SORCS1	Q8WY21	1168 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	BTN2A3P	Q96KV6	586 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	MCEE	Q96PE7	176 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	TKTL2	Q9H0I9	626 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	SIK2	Q9H0K1	926 aa		19.24	■□□□□ 0.67
C4A-256	ENST00000490663	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	19.24	■□□□□ 0.67
C4A-256	ENST00000490663	DOCK9	Q9BZ29	2069 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	C2CD4B	A6NLJ0	364 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	CHURC1-FNTB	B4DL54	471 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	SGK1	O00141	431 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	KRT3	P12035	628 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	PDGFRA	P16234	1089 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	ABCB4	P21439	1286 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	FNTB	P49356	437 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	ADK	P55263	362 aa	Known RBP	19.23	■□□□□ 0.67
C4A-256	ENST00000490663	DMC1	Q14565	340 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	CCDC14	Q49A88	953 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	WDR59	Q6PJI9	974 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	ZNF513	Q8N8E2	541 aa	Predicted RBP	19.23	■□□□□ 0.67
C4A-256	ENST00000490663	IL17RC	Q8NAC3	791 aa		19.23	■□□□□ 0.67
C4A-256	ENST00000490663	HJURP	Q8NCD3	748 aa	Predicted RBP	19.23	■□□□□ 0.67
C4A-256	ENST00000490663	C3orf20	Q8ND61	904 aa		19.23	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms