RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 AFG1LQ8WV93 481 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 AKAP1Q92667 903 aaKnown RBP eCLIP4.45□□□□□ -1.7
CD46-216ENST00000490278 TRMT61AQ96FX7 289 aaKnown RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 HIC2Q96JB3 615 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 ZSCAN31Q96LW9 406 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 KCND3Q9UK17 655 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 RAB21Q9UL25 225 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 SLC12A4Q9UP95 1085 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 MBD3L5A6NJ08 208 aaPredicted RBP4.44□□□□□ -1.7
CD46-216ENST00000490278 LRRC3CA6NJW4 275 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 NPHP1O15259 732 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 KRT38O76015 456 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 TK1P04183 234 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 CYP3A4P08684 503 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 MCM2P49736 904 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 AGTR2P50052 363 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 HMGA2P52926 109 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 TAS2R50P59544 299 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 SMAD1Q15797 465 aaKnown RBP4.44□□□□□ -1.7
CD46-216ENST00000490278 PROSER3Q2NL68 480 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 CERKLQ49MI3 558 aaPredicted RBP4.44□□□□□ -1.7
CD46-216ENST00000490278 FBXO47Q5MNV8 452 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 PRAMEF17Q5VTA0 474 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 DGAT2L7PQ6IED9 249 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 FBXO42Q6P3S6 717 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 CHSY1Q86X52 802 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 LAS2Q8IYD9 372 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 PNLDC1Q8NA58 520 aaKnown RBP4.44□□□□□ -1.7
CD46-216ENST00000490278 GOLGA1Q92805 767 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 RILPL2Q969X0 211 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 RITA1Q96K30 269 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 TWSG1Q9GZX9 223 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 ABHD16BQ9H3Z7 469 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 G6PC2Q9NQR9 355 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 TMLHEQ9NVH6 421 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 FEM1BQ9UK73 627 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 BAG5Q9UL15 447 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 MAFFQ9ULX9 164 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 KAT6AQ92794 2004 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 AOX1Q06278 1338 aa4.44□□□□□ -1.7
CD46-216ENST00000490278 POLR2AP24928 1970 aaKnown RBP4.44□□□□□ -1.7
CD46-216ENST00000490278 FNDC1Q4ZHG4 1894 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 C3orf70A6NLC5 250 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 TMEM232C9JQI7 657 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 PRYO14603 147 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 TFRCP02786 760 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 ALDOAP04075 364 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 CYP2D6P10635 497 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 PEPDP12955 493 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 NDUFS1P28331 727 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 HOXD12P35452 270 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 STAT6P42226 847 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 PAPOLAP51003 745 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 FOXL2P58012 376 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 ACTR2P61160 394 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 SLC14A1Q13336 389 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 GAB1Q13480 694 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 AWAT1Q58HT5 328 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 CC2D1BQ5T0F9 858 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 CYP26C1Q6V0L0 522 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 RANBP10Q6VN20 620 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 SYT13Q7L8C5 426 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 C2CD5Q86YS7 1000 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 HERC6Q8IVU3 1022 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 C16orf71Q8IYS4 520 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 SRFBP1Q8NEF9 429 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 ASB12Q8WXK4 309 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 NELL1Q92832 810 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 ASB2Q96Q27 587 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 PYM1Q9BRP8 204 aaKnown RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 NUAK2Q9H093 628 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 R3HDMLQ9H3Y0 253 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 ASNSD1Q9NWL6 643 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 LZTS1Q9Y250 596 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 PCDHA10Q9Y5I2 948 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 HEMK1Q9Y5R4 338 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 SIRT4Q9Y6E7 314 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 COL11A2P13942 1736 aaPredicted RBP4.43□□□□□ -1.7
CD46-216ENST00000490278 SPATA31A6Q5VVP1 1343 aa4.43□□□□□ -1.7
CD46-216ENST00000490278 CYP3A7-CYP3A51PA0A087WV96 503 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 CCDC189A1A4V9 331 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 FAM90A20PA6NIJ5 464 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 AGAP5A6NIR3 686 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 EIF3FO00303 357 aaPredicted RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 HEXIM1O94992 359 aaKnown RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 KAT7O95251 611 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 CYP21A2P08686 494 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD46-216ENST00000490278 CYP3A7P24462 503 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 VPS41P49754 854 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 RBM5P52756 815 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD46-216ENST00000490278 RCAN1P53805 252 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 TFF2Q03403 129 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 EFR3AQ14156 821 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 DCTN1Q14203 1278 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 TAF12Q16514 161 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms