RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 NKAPLQ5M9Q1 402 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 FAXCQ5TGI0 409 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF449Q6P9G9 518 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PIWIL3Q7Z3Z3 882 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KDELC2Q7Z4H8 507 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 USP37Q86T82 979 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SIAH3Q8IW03 269 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 LAS2Q8IYD9 372 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 WDR60Q8WVS4 1066 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 OR2A14Q96R47 310 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SEPT11Q9NVA2 429 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 RIC8BQ9NVN3 520 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MPP6Q9NZW5 540 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SRRDQ9UH36 339 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SARDHQ9UL12 918 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 HSF4Q9ULV5 492 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MYO3AQ8NEV4 1616 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SH3D21A4FU49 640 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ABLIM1O14639 778 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 KINO60870 393 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 RPP40O75818 363 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 GDF11O95390 407 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 GCNT3O95395 438 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 FOSL1P15407 271 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF8P17098 575 aaPredicted RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CPOXP36551 454 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 PEX19P40855 299 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 HK2P52789 917 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 UCP3P55916 312 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TNIP1Q15025 636 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 FAM187BQ17R55 369 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CCDC33Q8N5R6 958 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 HIPK4Q8NE63 616 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 NEDD1Q8NHV4 660 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 RAB40AQ8WXH6 277 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ADAMTS14Q8WXS8 1223 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SGCDQ92629 289 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SNAPC3Q92966 411 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 THAP7Q9BT49 309 aaPredicted RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SIK2Q9H0K1 926 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 NRIP3Q9NQ35 241 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 UCKL1Q9NWZ5 548 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 IL17BQ9UHF5 180 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 RIMKLBQ9ULI2 386 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 RRP7AQ9Y3A4 280 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SPATA31A5Q5VU36 1347 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SPATA31A6Q5VVP1 1343 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SPATA31A7Q8IWB4 1347 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ARHGAP5Q13017 1502 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SYNMO15061 1565 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 UGGT1Q9NYU2 1555 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CLTCQ00610 1675 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 GRXCR1A8MXD5 290 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 PEX10O60683 326 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ZFYP08048 801 aaPredicted RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 FPR1P21462 350 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CSF2RBP32927 897 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF132P52740 706 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CHAF1BQ13112 559 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 NTRK2Q16620 822 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 C2orf76Q3KRA6 126 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 PIK3AP1Q6ZUJ8 805 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 C15orf52Q6ZUT6 534 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CHST3Q7LGC8 479 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 B3GNT8Q7Z7M8 397 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SNX32Q86XE0 403 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CNTN4Q8IWV2 1026 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 LINC01465Q8N7H1 131 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ZFPM2Q8WW38 1151 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SEPT1Q8WYJ6 367 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TRMT61AQ96FX7 289 aaKnown RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TMX3Q96JJ7 454 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 SDF4Q9BRK5 362 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CCDC177Q9NQR7 707 aaPredicted RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM140Q9NV12 185 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 CTNND2Q9UQB3 1225 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 ATP11BQ9Y2G3 1177 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM184BQ9Y519 407 aaPredicted RBP3.19□□□□□ -1.9
UBXN4-208ENST00000490163 PCDHA5Q9Y5H7 936 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 KDRP35968 1356 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 FANCAO15360 1455 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 TRPM2O94759 1503 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 MYO5BQ9ULV0 1848 aa3.19□□□□□ -1.9
UBXN4-208ENST00000490163 PRAMEF25A6NGN4 478 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 NKX2-8O15522 239 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 KLK10O43240 276 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 STX6O43752 255 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 EIF2S1P05198 315 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ACP5P13686 325 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 HTD2P86397 168 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 TBCEQ15813 527 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 AASDHQ4L235 1098 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SLC44A4Q53GD3 710 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 CNSTQ6PJW8 725 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PLPPR4Q7Z2D5 763 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ADIPOR2Q86V24 386 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 IL17RCQ8NAC3 791 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 RBM15BQ8NDT2 890 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms