RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CIPCQ9C0C6 399 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 INTS2Q9H0H0 1204 aaKnown RBP20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TMEM245Q9H330 911 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 GNA14O95837 355 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TOP3BO95985 862 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 IGLV3-19P01714 112 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 AFPP02771 609 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 HLA-EP13747 358 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MAOBP27338 520 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 RING1Q06587 406 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ZNF252P-AS1Q0IIN9 211 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PTPRNQ16849 979 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SCUBE3Q8IX30 993 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 OR2I1PQ8NGU4 316 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MIS12Q9H081 205 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ABCB8Q9NUT2 735 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CYTH4Q9UIA0 394 aa20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.21■□□□□ 0.83
TNFRSF1B-202ENST00000489921 UPK3BL1B0FP48 263 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 UPK3BL2E5RIL1 263 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ARHGAP33O14559 1287 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SYNCRIPO60506 623 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NDUFS2O75306 463 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FBXO21O94952 628 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 EPHX1P07099 455 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ZNF445P59923 1031 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GFPT1Q06210 699 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CAMK2GQ13555 558 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DENND1BQ6P3S1 775 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CYB5D2Q8WUJ1 264 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DNASE2BQ8WZ79 361 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 AZIN2Q96A70 460 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SIPA1Q96FS4 1042 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FCRL2Q96LA5 508 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ACP6Q9NPH0 428 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NUMA1Q14980 2115 aa20.2■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CHD6Q8TD26 2715 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ACSL4O60488 711 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GJB3O75712 270 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CD70P32970 193 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TBX4P57082 545 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 MPP7Q5T2T1 576 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SYPL2Q5VXT5 272 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CHST9Q7L1S5 443 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 RABEPKQ7Z6M1 372 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 IRF2BP1Q8IU81 584 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 UNC45BQ8IWX7 931 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DQX1Q8TE96 717 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FOXJ1Q92949 421 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SLC39A13Q96H72 371 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PRICKLE1Q96MT3 831 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GTPBP2Q9BX10 602 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GPR174Q9BXC1 333 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SLC4A5Q9BY07 1137 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 UBE2TQ9NPD8 197 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GGA2Q9UJY4 613 aa20.19■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DMXL2Q8TDJ6 3036 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TBL1XO60907 577 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PABPC1P11940 636 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CD59P13987 128 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ST3GAL2Q16842 350 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NUGGCQ68CJ6 796 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GJB7Q6PEY0 223 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SERPINA13PQ6UXR4 307 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 MINDY1Q8N5J2 469 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ZNF366Q8N895 744 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CADM4Q8NFZ8 388 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 WFIKKN2Q8TEU8 576 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ZNF606Q8WXB4 792 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PRCCQ92733 491 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 MYO19Q96H55 970 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 IRX2Q9BZI1 471 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NFE2L3Q9Y4A8 694 aa20.18■□□□□ 0.82
TNFRSF1B-202ENST00000489921 BECN2A8MW95 431 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 IRAK2O43187 625 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PAPSS1O43252 624 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SPINK2P20155 84 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 APBA1Q02410 837 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 E2F5Q15329 346 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 MEA1Q16626 185 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SYCP2LQ5T4T6 812 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 MBLAC2Q68D91 279 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 BEND5Q7L4P6 421 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TMEM110Q86TL2 294 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 RGL4Q8IZJ4 473 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 AHI1Q8N157 1196 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 OR2T3Q8NH03 318 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 C1orf216Q8TAB5 229 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ADAM32Q8TC27 787 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 STK32AQ8WU08 396 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CRACR2AQ9BSW2 395 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DNAAF2Q9NVR5 837 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 RWDD2AQ9UIY3 292 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 INTS6Q9UL03 887 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TLR6Q9Y2C9 796 aa20.17■□□□□ 0.82
TNFRSF1B-202ENST00000489921 METTL12A8MUP2 240 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 KRT5P13647 590 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SLC9A1P19634 815 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms